Gene
RNA
| Item | Value |
|---|---|
| gene id | G1186313 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 51796365 ~ 51802602 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| immunoglobulin delta heavy chain, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1352877 | False | 288 | lncRNA | 0.51 | 2 | 51796365 | 51799627 |
| TU1352878 | True | 288 | lncRNA | 0.51 | 2 | 51796365 | 51802602 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486749 | LOC106601716 | coding | downstream | 189363 | 51592159 ~ 51607002 (-) |
| LOC110486760 | LOC101074561 | coding | downstream | 210774 | 51581861 ~ 51585591 (-) |
| carm1 | carm1 | coding | downstream | 215160 | 51566960 ~ 51581205 (-) |
| timm29 | LOC106606779 | coding | downstream | 233900 | 51559667 ~ 51562465 (-) |
| LOC118938317 | NA | coding | downstream | 265604 | 51526614 ~ 51530761 (-) |
| LOC118938556 | NA | coding | upstream | 298283 | 52100885 ~ 52101957 (-) |
| LOC110485216 | NA | coding | upstream | 353038 | 52155640 ~ 52331576 (-) |
| LOC110538721 | NA | coding | upstream | 383955 | 52186557 ~ 52189703 (-) |
| LOC110486769 | gtf2f1 | coding | upstream | 612717 | 52415319 ~ 52430034 (-) |
| LOC110486776 | LOC106606809 | coding | upstream | 927776 | 52730378 ~ 52741555 (-) |
| G1186274 | NA | non-coding | downstream | 59892 | 51731936 ~ 51736473 (-) |
| G1186222 | NA | non-coding | downstream | 143306 | 51630788 ~ 51653059 (-) |
| G1186224 | NA | non-coding | downstream | 146852 | 51631694 ~ 51649513 (-) |
| G1186085 | NA | non-coding | downstream | 167932 | 51627731 ~ 51628433 (-) |
| G1186214 | NA | non-coding | downstream | 169924 | 51625662 ~ 51626441 (-) |
| G1186082 | NA | non-coding | upstream | 34722 | 51837324 ~ 51850988 (-) |
| G1186348 | NA | non-coding | upstream | 66696 | 51869298 ~ 51874029 (-) |
| G1186217 | NA | non-coding | upstream | 126606 | 51929208 ~ 51929850 (-) |
| G1186398 | NA | non-coding | upstream | 169095 | 51971697 ~ 51977351 (-) |
| G1186438 | NA | non-coding | upstream | 290758 | 52093360 ~ 52093778 (-) |
| G1186154 | NA | other | downstream | 306124 | 51489777 ~ 51490241 (-) |
| G1186075 | NA | other | downstream | 422411 | 51352309 ~ 51373954 (-) |
| G1186080 | NA | other | downstream | 472434 | 51321800 ~ 51323931 (-) |
| G1185046 | NA | other | downstream | 1014507 | 50780265 ~ 50781858 (-) |
| LOC110485208 | LOC106606837 | other | downstream | 1038321 | 50732097 ~ 50824433 (-) |
| G1186381 | NA | other | upstream | 122361 | 51924963 ~ 52030660 (-) |
| G1186216 | NA | other | upstream | 208088 | 52010690 ~ 52011211 (-) |
| G1186670 | LOC100194703 | other | upstream | 856729 | 52659331 ~ 52659809 (-) |
| mosmoa | C20H16orf52 | other | upstream | 1804422 | 53607021 ~ 53638313 (-) |
| si:ch73-374l24.1 | LOC105026133 | other | upstream | 2004042 | 53806640 ~ 54049592 (-) |
