G1185538


Basic Information

Item Value
gene id G1185538
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51862593 ~ 51864290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351997
TGCCCTCCACAGACCATCTCCCTCAGCCAAGACAAACACTCTGAGTCTGTGCTCCTACTTTTACATAACCTTAGAAGACTCCCACAATGAGAGTTCTAGAATGTGTGTTCCTCCTGGCTCTCATCTCAGctgttcagggacagtcactCACCTCCTCTGAGTCAGTGGTGAAGAGCCCTGGAGAGTCAGTAACACTGTCATGTACTGTGTCTGGTTTCTCCATGGCTAGCTACTGGACGCACTGGATCCGTCAGAAACCAGGGAAAGGTCTAGAGTGGATTGGGCGCATTGACAGTGGCACTGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351997 True 305 lncRNA 0.51 3 51862593 51864290

Neighbor

gene id symbol gene type direction distance location
LOC118938088 NA coding upstream 9707 51840452 ~ 51852886 (+)
LOC118938318 LOC106606767 coding upstream 38636 51783888 ~ 51823957 (+)
LOC118938087 NA coding upstream 97977 51760793 ~ 51765924 (+)
LOC110486751 LOC106606781 coding upstream 272097 51586246 ~ 51590496 (+)
LOC110486745 LOC106601712 coding upstream 296262 51562364 ~ 51566331 (+)
LOC110486748 NA coding downstream 71752 51779397 ~ 51941040 (+)
LOC110486763 NA coding downstream 87826 51952116 ~ 51954859 (+)
LOC110485215 LOC106606764 coding downstream 183854 52014531 ~ 52091683 (+)
LOC110486764 LOC106606789 coding downstream 257193 52121483 ~ 52139499 (+)
LOC110486765 LOC106606792 coding downstream 276983 52141273 ~ 52142730 (+)
G1185623 NA non-coding upstream 126077 51731961 ~ 51736516 (+)
G1185578 NA non-coding upstream 141604 51604070 ~ 51720989 (+)
G1185564 carm1 non-coding upstream 285838 51574021 ~ 51576755 (+)
G1185534 LOC106606779 non-coding upstream 301226 51559721 ~ 51561367 (+)
G1185510 NA non-coding upstream 308657 51553700 ~ 51553936 (+)
G1185714 NA non-coding downstream 60799 51925089 ~ 51930454 (+)
G1185722 NA non-coding downstream 91880 51956170 ~ 52023060 (+)
G1185726 NA non-coding downstream 106683 51970973 ~ 51975692 (+)
G1185519 NA non-coding downstream 205535 52069825 ~ 52070857 (+)
G1185541 NA non-coding downstream 207950 52072240 ~ 52074041 (+)
G1185530 NA other upstream 15213 51830790 ~ 51847380 (+)
G1185539 NA other upstream 128269 51733649 ~ 51734324 (+)
G1185616 NA other upstream 144389 51717748 ~ 51718204 (+)
G1185535 NA other upstream 163947 51697876 ~ 51698646 (+)
G1185531 NA other downstream 5011 51869301 ~ 51880953 (+)
G1185687 NA other downstream 17098 51881388 ~ 51881976 (+)
G1185525 NA other downstream 34666 51898956 ~ 51899716 (+)
G1185528 NA other downstream 99133 51963423 ~ 51965490 (+)

Expression


Co-expression Network