G1186381


Basic Information

Item Value
gene id G1186381
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51924963 ~ 52030660 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352963
cacaatagtaaaacaactgactaacacaatggtaaaacaactggctaacacaatagtaaaacaactggctaacacaatagtaaaacaactgactgatacaatagtaaaacaactggctAACACagtggtaaaacaactgactaacacagtggtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatggtaaaacaactgactaacacaacagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatggtaaaacaactggctaacacaatagtaaaacaactggctaacacaatagtaaaacaactgactgatacaatagtaaaacaactggctaacacagtgttaaaacaactgactaacacagtggtaaaacaactgactaacacaatggggaaacaactgactaacacaatagtaaaacaactgactaacacaatagtagaacaactgactaacacaatggtaaaacaactgactaacacaatagtaaaacaactgactaacacaatggtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatggtaaaacaactgactaacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatggtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaagaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaacacaactgactaacacaataggaaaacaactgactaacacaatggtaaaacaactgacCAACACAATGGG
>TU1352962
cacaatagtaaaacaactgactgatacaataggaaaacaactgactaacacaatagtaaaacaactgactaacacaatggtaaaacaactgactaacacaatggtaaaataactgactaacacaatagtaaaacaactgactgatacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactgatacaatagtaaaacaactgactgacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgtaaCACAATAGTAAATCAATTGACTAATATAAAGgcaaaacaactgactaacacagtgacaaaacaactgactaacacaatgggaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacaatggtaaaacaactgactaacaatggtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatttgaaaacaactgactaacacaatagtaaaacaactgactgatacaatagtaaaacaactgactaacacaatggaaaaacaactgactaacacaatagtaaaacaactgactgatacaatggtaaaacaactgactaacacaatagtaaaacaactgactaacacaatgggaaaacagctgactaacacaatagtaaaacaactgactaacacaatggtaaaacaactggctaacacaatagtaaaacaactggctaacacaatagtaaaacaactgactgatacaatagtaaaacaactggctAACACagtggtaaaacaactgactaacacagtggtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatggtaaaacaactgactaacacaacagtaaaacaactgactaacacaatgggaaaacaactgactaacacaatagtaaaacaactgactaacacaatggtaaaacaactggctaacacaatagtaaaacaactggctaacacaatagtaaaacaactgactgatacaatagtaaaacaactggctAACACagtggtaaaacaactgactaacacagtggtaaaacaactgactaacacaatggggaaacaactgactaacacaatagtaaaacaactgactaacacaatagtagaacaactgactaacacaatgggaaaacaactgactaacacaatgggaaaacaactgactaacacaatggtaaaacaactgactaacac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106613027 isoform X9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352963 False 1425 TUCP 0.33 3 51924963 52028974
TU1352962 True 1473 TUCP 0.33 2 52025918 52030660

Neighbor

gene id symbol gene type direction distance location
LOC110486749 LOC106601716 coding downstream 317961 51592159 ~ 51607002 (-)
LOC110486760 LOC101074561 coding downstream 339372 51581861 ~ 51585591 (-)
carm1 carm1 coding downstream 343758 51566960 ~ 51581205 (-)
timm29 LOC106606779 coding downstream 362498 51559667 ~ 51562465 (-)
LOC118938317 NA coding downstream 394202 51526614 ~ 51530761 (-)
LOC118938556 NA coding upstream 70225 52100885 ~ 52101957 (-)
LOC110485216 NA coding upstream 124980 52155640 ~ 52331576 (-)
LOC110538721 NA coding upstream 155897 52186557 ~ 52189703 (-)
LOC110486769 gtf2f1 coding upstream 384659 52415319 ~ 52430034 (-)
LOC110486776 LOC106606809 coding upstream 699718 52730378 ~ 52741555 (-)
G1186348 NA non-coding downstream 50934 51869298 ~ 51874029 (-)
G1186082 NA non-coding downstream 73975 51837324 ~ 51850988 (-)
G1186283 NA non-coding downstream 110495 51742464 ~ 51814468 (-)
G1186312 LOC106606767 non-coding downstream 118943 51796793 ~ 51806020 (-)
G1186313 NA non-coding downstream 122361 51796365 ~ 51802602 (-)
G1186438 NA non-coding upstream 62700 52093360 ~ 52093778 (-)
G1186446 LOC106601675 non-coding upstream 75129 52105789 ~ 52106669 (-)
G1186457 NA non-coding upstream 81988 52112648 ~ 52112958 (-)
G1186460 NA non-coding upstream 86778 52117438 ~ 52117650 (-)
G1186467 NA non-coding upstream 112237 52142897 ~ 52144110 (-)
G1186154 NA other downstream 434722 51489777 ~ 51490241 (-)
G1186075 NA other downstream 551009 51352309 ~ 51373954 (-)
G1186080 NA other downstream 601032 51321800 ~ 51323931 (-)
G1185046 NA other downstream 1143105 50780265 ~ 50781858 (-)
LOC110485208 LOC106606837 other downstream 1166919 50732097 ~ 50824433 (-)
G1186670 LOC100194703 other upstream 628671 52659331 ~ 52659809 (-)
mosmoa C20H16orf52 other upstream 1576364 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 1775984 53806640 ~ 54049592 (-)
G1188147 NA other upstream 2418223 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 2434873 54409911 ~ 54470838 (-)

Expression


Co-expression Network