G1185774


Basic Information

Item Value
gene id G1185774
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52093375 ~ 52093611 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352250
atttacacctttcttcgcatatcttttatatATTCTCTTTTcaaacttcaaaacactctcctgcaacccgcctagctagccagaagctatccagaagctagccagtttactggctaacgttagtattcagctaaccacggtttgtggtcatcagctatcctttagctcgaaaagctatcggcagttttgtacaacgcgactcagaccagaacataccagacctatttttctctccat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352250 True 237 lncRNA 0.42 1 52093375 52093611

Neighbor

gene id symbol gene type direction distance location
LOC110485215 LOC106606764 coding upstream 1692 52014531 ~ 52091683 (+)
LOC110486763 NA coding upstream 138516 51952116 ~ 51954859 (+)
LOC110486748 NA coding upstream 152335 51779397 ~ 51941040 (+)
LOC118938088 NA coding upstream 240489 51840452 ~ 51852886 (+)
LOC118938318 LOC106606767 coding upstream 269418 51783888 ~ 51823957 (+)
LOC110486764 LOC106606789 coding downstream 27872 52121483 ~ 52139499 (+)
LOC110486765 LOC106606792 coding downstream 47662 52141273 ~ 52142730 (+)
LOC110486767 alkb7 coding downstream 281213 52374824 ~ 52390015 (+)
LOC110485217 fcl coding downstream 312566 52406177 ~ 52414576 (+)
LOC118938557 LOC106601687 coding downstream 350378 52443989 ~ 52444998 (+)
G1185541 NA non-coding upstream 19334 52072240 ~ 52074041 (+)
G1185519 NA non-coding upstream 22518 52069825 ~ 52070857 (+)
G1185722 NA non-coding upstream 70315 51956170 ~ 52023060 (+)
G1185726 NA non-coding upstream 117683 51970973 ~ 51975692 (+)
G1185714 NA non-coding upstream 162921 51925089 ~ 51930454 (+)
G1185775 NA non-coding downstream 1090 52094701 ~ 52095145 (+)
G1185782 NA non-coding downstream 8766 52102377 ~ 52102600 (+)
G1185783 NA non-coding downstream 9187 52102798 ~ 52103079 (+)
G1185793 NA non-coding downstream 11186 52104797 ~ 52107657 (+)
G1185795 NA non-coding downstream 16685 52110296 ~ 52110508 (+)
G1185528 NA other upstream 127885 51963423 ~ 51965490 (+)
G1185525 NA other upstream 193659 51898956 ~ 51899716 (+)
G1185687 NA other upstream 211399 51881388 ~ 51881976 (+)
G1185531 NA other upstream 212422 51869301 ~ 51880953 (+)
G1185815 NA other downstream 81655 52175266 ~ 52176505 (+)
G1185855 NA other downstream 180719 52274330 ~ 52355941 (+)
LOC110539012 LOC106606743 other downstream 910441 52907896 ~ 53046938 (+)

Expression


Co-expression Network