G1185783


Basic Information

Item Value
gene id G1185783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52102798 ~ 52103079 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352259
aaacggatggcactgtgataaactgcatccagattgctgagtagagtgttggaagcaattttgtagatgacatcgccgaagtcgaggatcggtaggttagtcagttttactagggtaagtttggcggcgtgagtgaaggaggctttgttgcggaatagaaagccgactctagatttgattttcgattggagatgtttgatatgagtctggaaggagagtttacagtctagccagacacctaggtacttatagatgtccacatattcaaggtcggaaccatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352259 True 282 lncRNA 0.45 1 52102798 52103079

Neighbor

gene id symbol gene type direction distance location
LOC110485215 LOC106606764 coding upstream 11115 52014531 ~ 52091683 (+)
LOC110486763 NA coding upstream 147939 51952116 ~ 51954859 (+)
LOC110486748 NA coding upstream 161758 51779397 ~ 51941040 (+)
LOC118938088 NA coding upstream 249912 51840452 ~ 51852886 (+)
LOC118938318 LOC106606767 coding upstream 278841 51783888 ~ 51823957 (+)
LOC110486764 LOC106606789 coding downstream 18404 52121483 ~ 52139499 (+)
LOC110486765 LOC106606792 coding downstream 38194 52141273 ~ 52142730 (+)
LOC110486767 alkb7 coding downstream 271745 52374824 ~ 52390015 (+)
LOC110485217 fcl coding downstream 303098 52406177 ~ 52414576 (+)
LOC118938557 LOC106601687 coding downstream 340910 52443989 ~ 52444998 (+)
G1185782 NA non-coding upstream 198 52102377 ~ 52102600 (+)
G1185775 NA non-coding upstream 7653 52094701 ~ 52095145 (+)
G1185774 NA non-coding upstream 9187 52093375 ~ 52093611 (+)
G1185541 NA non-coding upstream 28757 52072240 ~ 52074041 (+)
G1185519 NA non-coding upstream 31941 52069825 ~ 52070857 (+)
G1185793 NA non-coding downstream 1718 52104797 ~ 52107657 (+)
G1185795 NA non-coding downstream 7217 52110296 ~ 52110508 (+)
G1185805 NA non-coding downstream 37114 52140193 ~ 52140419 (+)
G1185807 NA non-coding downstream 39755 52142834 ~ 52143258 (+)
G1185786 LOC106606768 non-coding downstream 58711 52161790 ~ 52162090 (+)
G1185528 NA other upstream 137308 51963423 ~ 51965490 (+)
G1185525 NA other upstream 203082 51898956 ~ 51899716 (+)
G1185687 NA other upstream 220822 51881388 ~ 51881976 (+)
G1185531 NA other upstream 221845 51869301 ~ 51880953 (+)
G1185815 NA other downstream 72187 52175266 ~ 52176505 (+)
G1185855 NA other downstream 171251 52274330 ~ 52355941 (+)
LOC110539012 LOC106606743 other downstream 900973 52907896 ~ 53046938 (+)

Expression


Co-expression Network