G1185815


Basic Information

Item Value
gene id G1185815
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52175266 ~ 52176505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352291
ttatgtttgagatactttaaagtagccaccctttgccttgatgacagctttgcacacttttggcattctctcaaccagcttcatgaggtagccatctggaatgcatttcatataaggttaacaggtgtgccttggtaaaagtaaatttgtggaatttatttcctttcttaatgtatttgagcaaatcagttgtgttgtgacaaagtagggatggtataaagaagatagccctatttggtaaaagatattatggcaagaacagctctaataagtaaagagaaacgacagtccatcattactttaagacatgaagatcagtcaattaagaaaatgtcaagaactttgaaagtttcttcaagtgcagtcgcaagaaccatcaagcgctataatgaaactggctctcatgaggatctcCACAGGAATggaaacccagagttacctctgctgcagaggataatttcattagagttaccattctcagaaattgcaacccaaataaatgcttcacagagttcaagtaagacacatatctcaacatcaactgttcagaggagaatcaggccttcatggtcgaactgcagcaaagaaaccactactaaaggacaccaataataagaagagacttactttggccaagaaacatgagcaatggacattagagcggtggaaatctgtccttcggtctgatgagtccaaatgtttgatttttggttccaaccgcctgtgtctttgtgagacgcagagtaggtgaaaggatgatctccgcatgtgtgcttcccaccgtgaagcatggaggaggaggtgtgatgttgtggggttgctttgatggtgacactgtctgtgatttatttagaattcaaggcacacttaaccagcatggctaccacagcattctgcagcgatatgctctcccatctggtttgtgcttagtgggactatcatttgtttttcaacatgacaatgtcccaaaacacacctccaggctgtgtaagggctgtttgaccaagaatgagagtgatggaatgtttcatcagatgacctggcctccacaatcacccgacctcaagaaaagcagccaacaagtgctcagcatatgtggaaactccttcaagactactggttgagagaatgccaagagagtgcaaagctactgtgcatgtgatggctactttgaataatctcaaatgtattttgattggtttaacacttttctggttactacattattccatatgtgcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352291 True 1240 TUCP 0.41 1 52175266 52176505

Neighbor

gene id symbol gene type direction distance location
LOC110486765 LOC106606792 coding upstream 32536 52141273 ~ 52142730 (+)
LOC110486764 LOC106606789 coding upstream 35767 52121483 ~ 52139499 (+)
LOC110485215 LOC106606764 coding upstream 83583 52014531 ~ 52091683 (+)
LOC110486763 NA coding upstream 220407 51952116 ~ 51954859 (+)
LOC110486748 NA coding upstream 234226 51779397 ~ 51941040 (+)
LOC110486767 alkb7 coding downstream 198319 52374824 ~ 52390015 (+)
LOC110485217 fcl coding downstream 229672 52406177 ~ 52414576 (+)
LOC118938557 LOC106601687 coding downstream 267484 52443989 ~ 52444998 (+)
LOC110486773 LOC106601688 coding downstream 276289 52452794 ~ 52612169 (+)
LOC110486772 NA coding downstream 435743 52612244 ~ 52616224 (+)
G1185812 NA non-coding upstream 4549 52169756 ~ 52170717 (+)
G1185786 LOC106606768 non-coding upstream 13176 52161790 ~ 52162090 (+)
G1185807 NA non-coding upstream 32008 52142834 ~ 52143258 (+)
G1185805 NA non-coding upstream 34847 52140193 ~ 52140419 (+)
G1185795 NA non-coding upstream 64758 52110296 ~ 52110508 (+)
G1185817 NA non-coding downstream 1672 52178177 ~ 52184170 (+)
G1185835 NA non-coding downstream 57282 52233787 ~ 52234842 (+)
G1185788 NA non-coding downstream 68308 52244813 ~ 52246538 (+)
G1185841 NA non-coding downstream 80846 52257351 ~ 52258201 (+)
G1185898 NA non-coding downstream 169608 52346113 ~ 52346901 (+)
G1185528 NA other upstream 209776 51963423 ~ 51965490 (+)
G1185525 NA other upstream 275550 51898956 ~ 51899716 (+)
G1185687 NA other upstream 293290 51881388 ~ 51881976 (+)
G1185855 NA other downstream 97825 52274330 ~ 52355941 (+)
LOC110539012 LOC106606743 other downstream 827547 52907896 ~ 53046938 (+)
LOC110538743 LOC106601732 other downstream 1269918 53445335 ~ 53450473 (+)
G1187452 NA other downstream 2012062 54188567 ~ 54198015 (+)

Expression


Co-expression Network