G1185788


Basic Information

Item Value
gene id G1185788
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52244813 ~ 52246538 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352264
TTGGCCCTATGAGTTTCACTGTTATCGGACTGATCTATCagcgtctctgtctgtctgtctgactaatCTATcacaatctctgtctctctgactaatCTATCAGagtctctgtctatctgactaaTCTATCAGAGTCTCTGACTATCTGACTAATCTATCAGAatctctgtctatctgactaaTCTATCAGagtctctgtctatctgactaatctatcagtctctgtctatctgactaaTCTATCAGTCTCTGACTATCTGACTAATCTATCAGagtctctgtctatctgactcTATCTGACTAAGCTATCagtctctgtctatctgactaaTCTATCAGAGTCTCTGACTATTTTACTAATCTATCAGTCTCTGACTATCTGACTAATCTATCAGAGTCTCTGACTATCTGACTAATCTATCAGAGTCTCTGACTATCTGACTAAtctatcagtctctgtctctctgactaatCTATCAGagtatctgtctctctgactaATCTATcagagtctctgtctctctgactaatCTATCAGAGTCTCTGACTATCTGACTAATGTATCagtctctgtctatctgactaaTCTATcagtctctgtctctctgactaatCTATcagagtctctgtctctctgactaatCTATCAGAGTCTCTGACTATCTGACTAATGTATCAATCTCTGTCAATCTGACTAATCTATCAGAGTCTCTGACTATCTGACTAATGTATCagtctctgtctatctgactaaTCTATcagagtctctgtctctctgactaatCTATCAGAGTATCTGTCTTTCTGACTAATCTATCAGAGTCTCTGACTATCTGACTAATCTATCAGAGTCTCTGTCTCACTGACTAATCTATCAGagtatctgtctctctgactaATCTATcagagtctctgtctctctgactaatgtatcagtctctgtctatctgactcatgtatcagtctctgtctatctgactaaTCTATCAGagtctctgtctatctgactaaTCTATCAGagtctctgtctatctgactaatctatcagtctctgtctatctgactcTATCTGACTAAGCTATCagtctctgtctatctgactaaTCTATCAGAGTCTCTGACTCTCTGACTAATCTATCAGAatctctgtctatctgactaaTCTATCAGAGtctctgactatctgactgaTCTATCAGTCTCTGTCACTGACTAATCTATCAGAGTCTCTGACTATCTGACTAATCTATCAGAGTCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352264 True 1260 lncRNA 0.39 2 52244813 52246538

Neighbor

gene id symbol gene type direction distance location
LOC110486765 LOC106606792 coding upstream 102083 52141273 ~ 52142730 (+)
LOC110486764 LOC106606789 coding upstream 105314 52121483 ~ 52139499 (+)
LOC110485215 LOC106606764 coding upstream 153130 52014531 ~ 52091683 (+)
LOC110486763 NA coding upstream 289954 51952116 ~ 51954859 (+)
LOC110486748 NA coding upstream 303773 51779397 ~ 51941040 (+)
LOC110486767 alkb7 coding downstream 128286 52374824 ~ 52390015 (+)
LOC110485217 fcl coding downstream 159639 52406177 ~ 52414576 (+)
LOC118938557 LOC106601687 coding downstream 197451 52443989 ~ 52444998 (+)
LOC110486773 LOC106601688 coding downstream 206256 52452794 ~ 52612169 (+)
LOC110486772 NA coding downstream 365710 52612244 ~ 52616224 (+)
G1185835 NA non-coding upstream 9971 52233787 ~ 52234842 (+)
G1185817 NA non-coding upstream 60643 52178177 ~ 52184170 (+)
G1185812 NA non-coding upstream 74096 52169756 ~ 52170717 (+)
G1185786 LOC106606768 non-coding upstream 82723 52161790 ~ 52162090 (+)
G1185807 NA non-coding upstream 101555 52142834 ~ 52143258 (+)
G1185841 NA non-coding downstream 10813 52257351 ~ 52258201 (+)
G1185898 NA non-coding downstream 99575 52346113 ~ 52346901 (+)
G1185900 NA non-coding downstream 103510 52350048 ~ 52359478 (+)
G1185887 NA non-coding downstream 156484 52403022 ~ 52403680 (+)
G1185940 NA non-coding downstream 237941 52484479 ~ 52485136 (+)
G1185815 NA other upstream 68308 52175266 ~ 52176505 (+)
G1185528 NA other upstream 279323 51963423 ~ 51965490 (+)
G1185525 NA other upstream 345097 51898956 ~ 51899716 (+)
G1185855 NA other downstream 27792 52274330 ~ 52355941 (+)
LOC110539012 LOC106606743 other downstream 757514 52907896 ~ 53046938 (+)
LOC110538743 LOC106601732 other downstream 1199885 53445335 ~ 53450473 (+)
G1187452 NA other downstream 1942029 54188567 ~ 54198015 (+)

Expression


Co-expression Network