G1185841


Basic Information

Item Value
gene id G1185841
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52257351 ~ 52258201 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352336
CTATAATAGTGTTATGTCATCATTATAATATTGTTATGTCTTCATTATAATAGTGTTATGTCTTCAGTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCTTCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCTTCATTATAATAGTGTTATGTCTTCATTATAATAGTGTTATGTCATCATTATAATAGTGTTatgtcatcattataataaatcaaaatcaaatcaaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccgcaaacagcaagcaatgcaggtgtagaagcataaTAGTGTTATGTCATCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCTTCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCTTCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATGTCATCATTATAATGGTGTTATGTCATCATTATAATAGTGTTATGTCATCATTATAATGGTGTTATCATTATAATAGTGTTATGTCATCATTATAATAGTGTTATTTCGGCCTTGTGAAGGAGGATTCAGGTAAAGTGTAACCCATTTAGATTCAGAGAGAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352336 True 785 lncRNA 0.26 2 52257351 52258201

Neighbor

gene id symbol gene type direction distance location
LOC110486765 LOC106606792 coding upstream 114621 52141273 ~ 52142730 (+)
LOC110486764 LOC106606789 coding upstream 117852 52121483 ~ 52139499 (+)
LOC110485215 LOC106606764 coding upstream 165668 52014531 ~ 52091683 (+)
LOC110486763 NA coding upstream 302492 51952116 ~ 51954859 (+)
LOC110486748 NA coding upstream 316311 51779397 ~ 51941040 (+)
LOC110486767 alkb7 coding downstream 116623 52374824 ~ 52390015 (+)
LOC110485217 fcl coding downstream 147976 52406177 ~ 52414576 (+)
LOC118938557 LOC106601687 coding downstream 185788 52443989 ~ 52444998 (+)
LOC110486773 LOC106601688 coding downstream 194593 52452794 ~ 52612169 (+)
LOC110486772 NA coding downstream 354047 52612244 ~ 52616224 (+)
G1185788 NA non-coding upstream 10813 52244813 ~ 52246538 (+)
G1185835 NA non-coding upstream 22509 52233787 ~ 52234842 (+)
G1185817 NA non-coding upstream 73181 52178177 ~ 52184170 (+)
G1185812 NA non-coding upstream 86634 52169756 ~ 52170717 (+)
G1185786 LOC106606768 non-coding upstream 95261 52161790 ~ 52162090 (+)
G1185898 NA non-coding downstream 87912 52346113 ~ 52346901 (+)
G1185900 NA non-coding downstream 91847 52350048 ~ 52359478 (+)
G1185887 NA non-coding downstream 144821 52403022 ~ 52403680 (+)
G1185940 NA non-coding downstream 226278 52484479 ~ 52485136 (+)
G1185815 NA other upstream 80846 52175266 ~ 52176505 (+)
G1185528 NA other upstream 291861 51963423 ~ 51965490 (+)
G1185525 NA other upstream 357635 51898956 ~ 51899716 (+)
G1185855 NA other downstream 16129 52274330 ~ 52355941 (+)
LOC110539012 LOC106606743 other downstream 745851 52907896 ~ 53046938 (+)
LOC110538743 LOC106601732 other downstream 1188222 53445335 ~ 53450473 (+)
G1187452 NA other downstream 1930366 54188567 ~ 54198015 (+)

Expression


Co-expression Network