G1185887


Basic Information

Item Value
gene id G1185887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52403022 ~ 52403680 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352397
tagcagatgttctgaaagagctgaaaaacctggacccgtacaaatcagctgggcttgacaatctggaccctctatttctgaaactatccgccgccattgtcgcaaccactattaccagcctgttcaacctctcattcatatcgtctgagatccccaaggattggaaagctgccgcagtcatccccctcttcaaagggggagacaccctggacccaaactgttacagacctatatccatcctgccctgcctatctaaggtcttcgaaagccaagtcaacaaacagatcactgaccattttgaatcccaccgtaccttctccgctgtgcaatctggtttccgagccggtcacgggtgcacctcagccacgctcaaggtactaaacgatatcataacctccatcaataaaagacagtactgtgcagccgtcttcattgacctggccaaggctttcgactctgtcaatcaccatattcttatcggtagactcagtagcctcggtttttctaatgactgccttgcctggttcaccaactactttgcagacagagttcagtgtgtcaaatcggagggcatgctgtccggtcctctgggagtctctatgggggtgccacagggttcaattctcgggccgactcttttctctgtatatatcaatgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352397 True 659 lncRNA 0.49 1 52403022 52403680

Neighbor

gene id symbol gene type direction distance location
LOC110486767 alkb7 coding upstream 13007 52374824 ~ 52390015 (+)
LOC110486765 LOC106606792 coding upstream 260292 52141273 ~ 52142730 (+)
LOC110486764 LOC106606789 coding upstream 263523 52121483 ~ 52139499 (+)
LOC110485215 LOC106606764 coding upstream 311339 52014531 ~ 52091683 (+)
LOC110486763 NA coding upstream 448163 51952116 ~ 51954859 (+)
LOC110485217 fcl coding downstream 2497 52406177 ~ 52414576 (+)
LOC118938557 LOC106601687 coding downstream 40309 52443989 ~ 52444998 (+)
LOC110486773 LOC106601688 coding downstream 49114 52452794 ~ 52612169 (+)
LOC110486772 NA coding downstream 208568 52612244 ~ 52616224 (+)
LOC118938093 NA coding downstream 282183 52685863 ~ 52688094 (+)
G1185900 NA non-coding upstream 43544 52350048 ~ 52359478 (+)
G1185898 NA non-coding upstream 56121 52346113 ~ 52346901 (+)
G1185841 NA non-coding upstream 144821 52257351 ~ 52258201 (+)
G1185788 NA non-coding upstream 156484 52244813 ~ 52246538 (+)
G1185835 NA non-coding upstream 168180 52233787 ~ 52234842 (+)
G1185940 NA non-coding downstream 80799 52484479 ~ 52485136 (+)
G1185921 NA non-coding downstream 214014 52617694 ~ 52621551 (+)
G1185919 NA non-coding downstream 218002 52621682 ~ 52624208 (+)
G1185855 NA other upstream 47081 52274330 ~ 52355941 (+)
G1185815 NA other upstream 226517 52175266 ~ 52176505 (+)
LOC110539012 LOC106606743 other downstream 600372 52907896 ~ 53046938 (+)
LOC110538743 LOC106601732 other downstream 1042743 53445335 ~ 53450473 (+)
G1187452 NA other downstream 1784887 54188567 ~ 54198015 (+)
G1187390 NA other downstream 1860386 54264066 ~ 54265028 (+)
axin2 LOC105026129 other downstream 1887905 54272638 ~ 54300365 (+)

Expression


Co-expression Network