G1186564


Basic Information

Item Value
gene id G1186564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52403070 ~ 52404921 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353203
gtgtttttattattttttatttcacctttatttaaccaggtaggctagttgagaacaagttctcatttacaactgcgacctggccaagataaaacatagcagtgtgaacagacaacaacacagagttacacatggagtaaacaataaacaagtcaataacacagtggaaagaaaaaaatagtctatatacattgtgtgcaaaagccatgaggaggtaggcgaataattacaatttagcagattaacactggagtgataaatgatcagatgaacatgtgcaggtagagatactggtgtgcaaaagagcagaaaagtaaataaatataaacagtttggggatgaggtaggtaaattgggtgggctatttaccgatggactatgtacagctgcagcgatcggttagctgctcagatagcagatgtttgaagttggtgagggagataagtctccaacttcagcgatttttgccattcgttccagtcacaggcagcagagaactggaaggaaaggcagccaaatgaggtgttggctttagggatgatcagtgagatacacctgctggagcgcgtgctacgggtgggtgttgccatcgtgaccagtgaactgagataaggcggagctttacctagcatcgacttgtagatgacctggagccagtgggtctggtgacgaatatgtagcgagggccagccgactagagcatacaggtcgcagtggtgggtggtataaggtgctttagtaactaaacggatggcactgtgataaactgcatccagtttgctgagtagagtattggaagctattttgtagataacatcgccgaagtcgaggatcggtaggatagtcagttttactagggtaagtttggcggcgtgagtgcggaatagaaagccaactctagatttgattttagattggagatgtttgatatgagtctggaaggagagtttacagtctagccagacacctaggtacttatagatgtccacatattctaggtcagaactatccagggtggtgatgctagtcgggcatgcgggtgcaggcagcgaactgttgaaaagcatgcatttggttttaatagcgtttaagaacagttggaggccacggaaggagtgttgtatggcattgaagctcgtttggaggttagatagcacagtgtccaaggaagggccagaagtatacagaatggtgtcgtctgcgtagaggtggatcagggaatcgcccgcagcaagagcaacatcattgatatatacagagaaaagagtcggcccgagaattgaaccctgtggcacccccatagagactcccagaggaccggacagcatgccctccgatttgacacactgaactctgtctgcaaagtagttggtgaaccaggcaaggcagtcattagaaaaaccgaggctactgagtctaccgataagaatatggtgattgacagagtcgaaagccttggccaggtcaatgaagacggctgcacagtactgtcttttattgatggaggttatgatatcgtttagtaccttgagcgtggctgaggtgcacccgtgaccggctcggaaaccagattgcacagcggagaaggtacggtgggattcaaaatggtcagtgatctgtttgttgacttggctttcgaagaccttagataggcagggcaggatggatataggtctgtaacagtttgggtccagggtgtctccccctttgaagagggggatgactgcggcagctttccaatccttggggatctcagacgatatgaatgagaggttgaacaggctggtaatagtggttgcgacaatggcggcggatagtttcagaaatagagggtccagattgtcaagcccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353203 True 1852 lncRNA 0.46 1 52403070 52404921

Neighbor

gene id symbol gene type direction distance location
LOC110485216 NA coding downstream 71494 52155640 ~ 52331576 (-)
LOC110538721 NA coding downstream 213367 52186557 ~ 52189703 (-)
LOC118938556 NA coding downstream 301113 52100885 ~ 52101957 (-)
LOC110486749 LOC106601716 coding downstream 796068 51592159 ~ 51607002 (-)
LOC110486760 LOC101074561 coding downstream 817479 51581861 ~ 51585591 (-)
LOC110486769 gtf2f1 coding upstream 10398 52415319 ~ 52430034 (-)
LOC110486776 LOC106606809 coding upstream 325457 52730378 ~ 52741555 (-)
LOC110485222 LOC106601739 coding upstream 688745 53093666 ~ 53107919 (-)
LOC110538731 LOC106592182 coding upstream 841473 53246394 ~ 53250376 (-)
LOC110539023 LOC106601728 coding upstream 953439 53358360 ~ 53417730 (-)
G1186563 NA non-coding downstream 82 52402536 ~ 52402988 (-)
G1186562 NA non-coding downstream 629 52400944 ~ 52402441 (-)
G1186535 NA non-coding downstream 3684 52324385 ~ 52399386 (-)
G1186536 NA non-coding downstream 9819 52388818 ~ 52393251 (-)
G1186547 NA non-coding downstream 32933 52347624 ~ 52370137 (-)
G1186566 NA non-coding upstream 3154 52408075 ~ 52408285 (-)
G1186567 NA non-coding upstream 4709 52409630 ~ 52410408 (-)
G1186568 NA non-coding upstream 6315 52411236 ~ 52411731 (-)
G1186571 NA non-coding upstream 8359 52413280 ~ 52414575 (-)
G1186639 NA non-coding upstream 170387 52575308 ~ 52582717 (-)
G1186381 NA other downstream 372410 51924963 ~ 52030660 (-)
G1186216 NA other downstream 391859 52010690 ~ 52011211 (-)
G1186154 NA other downstream 912829 51489777 ~ 51490241 (-)
G1186075 NA other downstream 1029116 51352309 ~ 51373954 (-)
G1186080 NA other downstream 1079139 51321800 ~ 51323931 (-)
G1186670 LOC100194703 other upstream 254410 52659331 ~ 52659809 (-)
mosmoa C20H16orf52 other upstream 1202103 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 1401723 53806640 ~ 54049592 (-)
G1188147 NA other upstream 2043962 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 2060612 54409911 ~ 54470838 (-)

Expression


Co-expression Network