G1186567


Basic Information

Item Value
gene id G1186567
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52409630 ~ 52410408 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353206
AGATCAGGTGTGGCCCATTAGTGGGTGCGGCCACTTCCTGAActcacttaacaagatagaggatagagagagttttgttgacacTAAGAACGGAATGTACATGTTCATAAGTAGTATTTTTAGAACGCTCTTGTGGTTTTAATGGAAAGTtgtcttaatgttctgagaatattactaaatagaaccatgaggaaatcGGTAGGAAACGTTACGCTGAAGTACTAAAATTCCCACATAAGAACGTTGttcttaatgttctctgaacaatttgagaacattgctttaaatagaaccatgaagaaacctgtaggaaacattaTGCTGAAATTCCTACAGAAGAACGTTGTTCTTAATCTTCTCTGAATAATTTGAGAACATtgctttaaatagaaccatgaagaaacctgtaggaaacattaTGCTGAAATTCCTACAGAAGAACGTTGTTCTTAATCTTCTCTGAATAATTTGAGAACATTGCTTTAAATAAAAGCATGaagaaacctgtaggaaacattatgctgaaattctgaaattcccacagaagaacgttgtttcttaacttTCTGAGAGCataactttaaatagaaccacgaggaacctgtaggaaatgttatgctaaagtactgaaattcccacagaagaaacatatggttctcagaacattatgtgctagctgggctgTGCCATGTAATGAGGGACTTGCACCAGCTACTGAAATGCATCTTTTGTTAAGTTCATCAGGTAATAAATGAGGTGCAAGGGAGGCTGGAGTGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353206 True 779 lncRNA 0.37 1 52409630 52410408

Neighbor

gene id symbol gene type direction distance location
LOC110485216 NA coding downstream 78054 52155640 ~ 52331576 (-)
LOC110538721 NA coding downstream 219927 52186557 ~ 52189703 (-)
LOC118938556 NA coding downstream 307673 52100885 ~ 52101957 (-)
LOC110486749 LOC106601716 coding downstream 802628 51592159 ~ 51607002 (-)
LOC110486760 LOC101074561 coding downstream 824039 51581861 ~ 51585591 (-)
LOC110486769 gtf2f1 coding upstream 4911 52415319 ~ 52430034 (-)
LOC110486776 LOC106606809 coding upstream 319970 52730378 ~ 52741555 (-)
LOC110485222 LOC106601739 coding upstream 683258 53093666 ~ 53107919 (-)
LOC110538731 LOC106592182 coding upstream 835986 53246394 ~ 53250376 (-)
LOC110539023 LOC106601728 coding upstream 947952 53358360 ~ 53417730 (-)
G1186566 NA non-coding downstream 1345 52408075 ~ 52408285 (-)
G1186564 NA non-coding downstream 4709 52403070 ~ 52404921 (-)
G1186563 NA non-coding downstream 6642 52402536 ~ 52402988 (-)
G1186562 NA non-coding downstream 7189 52400944 ~ 52402441 (-)
G1186536 NA non-coding downstream 16379 52388818 ~ 52393251 (-)
G1186568 NA non-coding upstream 828 52411236 ~ 52411731 (-)
G1186571 NA non-coding upstream 2872 52413280 ~ 52414575 (-)
G1186639 NA non-coding upstream 164900 52575308 ~ 52582717 (-)
G1186641 NA non-coding upstream 170723 52581131 ~ 52582088 (-)
G1186635 NA non-coding upstream 200893 52611301 ~ 52612079 (-)
G1186381 NA other downstream 378970 51924963 ~ 52030660 (-)
G1186216 NA other downstream 398419 52010690 ~ 52011211 (-)
G1186154 NA other downstream 919389 51489777 ~ 51490241 (-)
G1186075 NA other downstream 1035676 51352309 ~ 51373954 (-)
G1186080 NA other downstream 1085699 51321800 ~ 51323931 (-)
G1186670 LOC100194703 other upstream 248923 52659331 ~ 52659809 (-)
mosmoa C20H16orf52 other upstream 1196616 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 1396236 53806640 ~ 54049592 (-)
G1188147 NA other upstream 2038475 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 2055125 54409911 ~ 54470838 (-)

Expression


Co-expression Network