G1186639


Basic Information

Item Value
gene id G1186639
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52575308 ~ 52582717 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353281
cagatagaaaggatagaaataacatgtcaaccctgttactcccagatagaaaggatagaaataacacatcaaccctgttactccctgatagaaaggatagaaataacacgtcaaccctgttactcccagatagaaaggatagaaataacATGTCGACCCTGTTACTCCCAGATAGAAAGGCtagaaataacacgtcaaccctgttactcccagatagaaaggatagaaataacacgtcaaccctgttactccctgatagaaaggatagaaataacaggtcaaccctgttactcccagatagaaataacacgtcaaccctgttactcctagatagaaaggatagaaataacacgtcaaccc
>TU1353282
ccctgttactcccagatagaaaggatagaaataacacatcaaccctgttactcccagatagaaaggatagaaataacacgtcaaccctgttactcccagatagaaaggatagaaataacatgtcaaccctgttactcccagATAGAAAGGCTAGAAATAACACgtcaaccctgttactcccagatagaaataacacgtcaaccctgttactcctagatagaaaggatagaaataacacgtcaaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353281 False 360 lncRNA 0.40 2 52575308 52581052
TU1353282 True 246 lncRNA 0.41 2 52575308 52582717

Neighbor

gene id symbol gene type direction distance location
LOC110486769 gtf2f1 coding downstream 145274 52415319 ~ 52430034 (-)
LOC110485216 NA coding downstream 243732 52155640 ~ 52331576 (-)
LOC110538721 NA coding downstream 385605 52186557 ~ 52189703 (-)
LOC118938556 NA coding downstream 473351 52100885 ~ 52101957 (-)
LOC110486749 LOC106601716 coding downstream 968306 51592159 ~ 51607002 (-)
LOC110486776 LOC106606809 coding upstream 147661 52730378 ~ 52741555 (-)
LOC110485222 LOC106601739 coding upstream 510949 53093666 ~ 53107919 (-)
LOC110538731 LOC106592182 coding upstream 663677 53246394 ~ 53250376 (-)
LOC110539023 LOC106601728 coding upstream 775643 53358360 ~ 53417730 (-)
LOC118938325 LOC106606746 coding upstream 847315 53430032 ~ 53440075 (-)
G1186571 NA non-coding downstream 160733 52413280 ~ 52414575 (-)
G1186568 NA non-coding downstream 163577 52411236 ~ 52411731 (-)
G1186567 NA non-coding downstream 164900 52409630 ~ 52410408 (-)
G1186566 NA non-coding downstream 167023 52408075 ~ 52408285 (-)
G1186564 NA non-coding downstream 170387 52403070 ~ 52404921 (-)
G1186635 NA non-coding upstream 28584 52611301 ~ 52612079 (-)
G1186652 NA non-coding upstream 42645 52625362 ~ 52625637 (-)
G1186656 NA non-coding upstream 48698 52631415 ~ 52631633 (-)
G1186658 NA non-coding upstream 52570 52635287 ~ 52635589 (-)
G1186661 NA non-coding upstream 61657 52644374 ~ 52644597 (-)
G1186381 NA other downstream 544648 51924963 ~ 52030660 (-)
G1186216 NA other downstream 564097 52010690 ~ 52011211 (-)
G1186154 NA other downstream 1085067 51489777 ~ 51490241 (-)
G1186075 NA other downstream 1201354 51352309 ~ 51373954 (-)
G1186080 NA other downstream 1251377 51321800 ~ 51323931 (-)
G1186670 LOC100194703 other upstream 76614 52659331 ~ 52659809 (-)
mosmoa C20H16orf52 other upstream 1024307 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 1223927 53806640 ~ 54049592 (-)
G1188147 NA other upstream 1866166 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 1882816 54409911 ~ 54470838 (-)

Expression


Co-expression Network