Gene
RNA
| Item | Value |
|---|---|
| gene id | G1186641 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 52581131 ~ 52582088 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative mediator of RNA polymerase II transcription subunit 12 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1353284 | False | 337 | lncRNA | 0.41 | 2 | 52581131 | 52582088 |
| TU1353285 | True | 337 | lncRNA | 0.41 | 2 | 52581668 | 52582088 |
52,579,200
52,579,600
52,580,000
52,580,400
52,580,800
52,581,200
52,581,600
52,582,000
52,582,400
52,582,800
52,583,200
52,583,600
52,584,000
52,584,400
52,584,800
52,585,200
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486769 | gtf2f1 | coding | downstream | 151097 | 52415319 ~ 52430034 (-) |
| LOC110485216 | NA | coding | downstream | 249555 | 52155640 ~ 52331576 (-) |
| LOC110538721 | NA | coding | downstream | 391428 | 52186557 ~ 52189703 (-) |
| LOC118938556 | NA | coding | downstream | 479174 | 52100885 ~ 52101957 (-) |
| LOC110486749 | LOC106601716 | coding | downstream | 974129 | 51592159 ~ 51607002 (-) |
| LOC110486776 | LOC106606809 | coding | upstream | 148290 | 52730378 ~ 52741555 (-) |
| LOC110485222 | LOC106601739 | coding | upstream | 511578 | 53093666 ~ 53107919 (-) |
| LOC110538731 | LOC106592182 | coding | upstream | 664306 | 53246394 ~ 53250376 (-) |
| LOC110539023 | LOC106601728 | coding | upstream | 776272 | 53358360 ~ 53417730 (-) |
| LOC118938325 | LOC106606746 | coding | upstream | 847944 | 53430032 ~ 53440075 (-) |
| G1186571 | NA | non-coding | downstream | 166556 | 52413280 ~ 52414575 (-) |
| G1186568 | NA | non-coding | downstream | 169400 | 52411236 ~ 52411731 (-) |
| G1186567 | NA | non-coding | downstream | 170723 | 52409630 ~ 52410408 (-) |
| G1186566 | NA | non-coding | downstream | 172846 | 52408075 ~ 52408285 (-) |
| G1186564 | NA | non-coding | downstream | 176210 | 52403070 ~ 52404921 (-) |
| G1186635 | NA | non-coding | upstream | 29213 | 52611301 ~ 52612079 (-) |
| G1186652 | NA | non-coding | upstream | 43274 | 52625362 ~ 52625637 (-) |
| G1186656 | NA | non-coding | upstream | 49327 | 52631415 ~ 52631633 (-) |
| G1186658 | NA | non-coding | upstream | 53199 | 52635287 ~ 52635589 (-) |
| G1186661 | NA | non-coding | upstream | 62286 | 52644374 ~ 52644597 (-) |
| G1186381 | NA | other | downstream | 550471 | 51924963 ~ 52030660 (-) |
| G1186216 | NA | other | downstream | 569920 | 52010690 ~ 52011211 (-) |
| G1186154 | NA | other | downstream | 1090890 | 51489777 ~ 51490241 (-) |
| G1186075 | NA | other | downstream | 1207177 | 51352309 ~ 51373954 (-) |
| G1186080 | NA | other | downstream | 1257200 | 51321800 ~ 51323931 (-) |
| G1186670 | LOC100194703 | other | upstream | 77243 | 52659331 ~ 52659809 (-) |
| mosmoa | C20H16orf52 | other | upstream | 1024936 | 53607021 ~ 53638313 (-) |
| si:ch73-374l24.1 | LOC105026133 | other | upstream | 1224556 | 53806640 ~ 54049592 (-) |
| G1188147 | NA | other | upstream | 1866795 | 54448883 ~ 54450020 (-) |
| G1188127 | LOC106601757 | other | upstream | 1883445 | 54409911 ~ 54470838 (-) |
