G1186635


Basic Information

Item Value
gene id G1186635
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52611301 ~ 52612079 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353277
GTTTCTGTCtcaccaacacagacacacacattatctCCGCGCCCTACATGCGCCCAAAAACATGTGTAGGAGTTTAGActgactcatacacacacacacacaaaaacactgacacacacacatacagtacactcgATGACACACGCATACACTCAATGCAGACACAAACAGGCGATACGTCATCTGATTTCCTGTCTCTACACACAGATGAAAGTGTGGCACAGAGAATGACACTCCAACAGGTGAATTCCACATGAAGTGTTCACTGAATACTGATTGGATGGTTGGCCTGGGCTCCCTGTCTCTAATTATAACTGTAAAGACGATGAGCAGGTTCCAGAAGTAGTCCTACAGTCCACAATGACCCTGCTGTACTGTCATCTCTCTCAGCTCTGGTCCTGCTGATGATAACATGTTTTGCCATGGATCAATGAAACCTACTGTAAATGAGTCAGACTCAACTTAACTCTTTCACCACCCTCATTCAtttcattttctctcttttctttcggCTGGCATCTCAAATTGGCAGTTCACCGGGATCAACAAGAGACCCATTACTCAAAACTCAAATTCCCACAATGTCTCACTCTCACTTCCTGTATTCCTTTCACAGCTTCTGCTGGGCTGACACGCCCTTCCAGTAGTCGAGGATGTCGTGGAGGTCCTCCCCTTTGGCAAACTGCACCTTCTTCCTTAAGGCGTTCCCGGCCGTGACGTAGCATGACTCATCCCTCTGGCCCTTCCTGTAGGGCCGGAACCTCTCCCAGATCCTCAGA

Function

NR:

description
protein phosphatase 1 regulatory subunit 29-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353277 True 779 lncRNA 0.47 1 52611301 52612079

Neighbor

gene id symbol gene type direction distance location
LOC110486769 gtf2f1 coding downstream 181267 52415319 ~ 52430034 (-)
LOC110485216 NA coding downstream 279725 52155640 ~ 52331576 (-)
LOC110538721 NA coding downstream 421598 52186557 ~ 52189703 (-)
LOC118938556 NA coding downstream 509344 52100885 ~ 52101957 (-)
LOC110486749 LOC106601716 coding downstream 1004299 51592159 ~ 51607002 (-)
LOC110486776 LOC106606809 coding upstream 118299 52730378 ~ 52741555 (-)
LOC110485222 LOC106601739 coding upstream 481587 53093666 ~ 53107919 (-)
LOC110538731 LOC106592182 coding upstream 634315 53246394 ~ 53250376 (-)
LOC110539023 LOC106601728 coding upstream 746281 53358360 ~ 53417730 (-)
LOC118938325 LOC106606746 coding upstream 817953 53430032 ~ 53440075 (-)
G1186639 NA non-coding downstream 28584 52575308 ~ 52582717 (-)
G1186641 NA non-coding downstream 29213 52581131 ~ 52582088 (-)
G1186571 NA non-coding downstream 196726 52413280 ~ 52414575 (-)
G1186568 NA non-coding downstream 199570 52411236 ~ 52411731 (-)
G1186567 NA non-coding downstream 200893 52409630 ~ 52410408 (-)
G1186652 NA non-coding upstream 13283 52625362 ~ 52625637 (-)
G1186656 NA non-coding upstream 19336 52631415 ~ 52631633 (-)
G1186658 NA non-coding upstream 23208 52635287 ~ 52635589 (-)
G1186661 NA non-coding upstream 32295 52644374 ~ 52644597 (-)
G1186664 NA non-coding upstream 37067 52649146 ~ 52649414 (-)
G1186381 NA other downstream 580641 51924963 ~ 52030660 (-)
G1186216 NA other downstream 600090 52010690 ~ 52011211 (-)
G1186154 NA other downstream 1121060 51489777 ~ 51490241 (-)
G1186075 NA other downstream 1237347 51352309 ~ 51373954 (-)
G1186080 NA other downstream 1287370 51321800 ~ 51323931 (-)
G1186670 LOC100194703 other upstream 47252 52659331 ~ 52659809 (-)
mosmoa C20H16orf52 other upstream 994945 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 1194565 53806640 ~ 54049592 (-)
G1188147 NA other upstream 1836804 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 1853454 54409911 ~ 54470838 (-)

Expression


Co-expression Network