G1186741


Basic Information

Item Value
gene id G1186741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52778079 ~ 52778344 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353402
TATACTTCAAGTGTACGACGACAACTGGAGGAGACTCGATGTGAAGCCCAAATCCATGCGCTTCCATGTACAATGTGACAATTCGATAACTGTTTTCCTACTATTGGAATATACGCCATTGAAAACGTTTTGGATGTTTTTAGGGAAGCACTCACCATTTTTCTGAGACAAGGCAGAAAGAGGGAATGTATTTAATTTGAACTGAAAGAAATATTCGGACTCATATGATTATTTCTAGAAGTCCTTCTCGTGGATCTACAATGCGC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353402 True 266 lncRNA 0.39 1 52778079 52778344

Neighbor

gene id symbol gene type direction distance location
leg leg coding upstream 24162 52749848 ~ 52753917 (+)
LOC110486774 sgsm3 coding upstream 46270 52705551 ~ 52731809 (+)
LOC118938093 NA coding upstream 89985 52685863 ~ 52688094 (+)
LOC110486772 NA coding upstream 161861 52612244 ~ 52616224 (+)
LOC110486773 LOC106601688 coding upstream 165910 52452794 ~ 52612169 (+)
LOC110539012 LOC106606743 coding downstream 129552 52907896 ~ 53046938 (+)
LOC110486782 LOC106601683 coding downstream 337928 53116272 ~ 53122404 (+)
LOC110518612 LOC106601692 coding downstream 355206 53133550 ~ 53138298 (+)
LOC118938324 NA coding downstream 449796 53228140 ~ 53245488 (+)
LOC110538743 LOC106601732 coding downstream 666991 53445335 ~ 53450473 (+)
G1186726 NA non-coding upstream 14170 52763663 ~ 52763909 (+)
G1186719 NA non-coding upstream 18231 52759636 ~ 52759848 (+)
G1186022 LOC100194703 non-coding upstream 118201 52659585 ~ 52659878 (+)
G1186014 NA non-coding upstream 141502 52636288 ~ 52636577 (+)
G1186011 NA non-coding upstream 150165 52627371 ~ 52627914 (+)
G1186747 NA non-coding downstream 5781 52784125 ~ 52784343 (+)
G1186749 NA non-coding downstream 12600 52790944 ~ 52791411 (+)
G1186767 NA non-coding downstream 52291 52830635 ~ 52832136 (+)
G1186789 NA non-coding downstream 133840 52912184 ~ 52912668 (+)
G1186801 NA non-coding downstream 154591 52932935 ~ 52933317 (+)
LOC110486767 alkb7 other upstream 388883 52374824 ~ 52390015 (+)
G1185855 NA other upstream 422138 52274330 ~ 52355941 (+)
G1185815 NA other upstream 601574 52175266 ~ 52176505 (+)
LOC110486764 LOC106606789 other upstream 646052 52121483 ~ 52139499 (+)
LOC110485215 LOC106606764 other upstream 708464 52014531 ~ 52091683 (+)
G1187452 NA other downstream 1410223 54188567 ~ 54198015 (+)
G1187390 NA other downstream 1485722 54264066 ~ 54265028 (+)
axin2 LOC105026129 other downstream 1513241 54272638 ~ 54300365 (+)

Expression


Co-expression Network