Gene
RNA
| Item | Value |
|---|---|
| gene id | G1186789 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 52912184 ~ 52912668 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1353458 | False | 237 | lncRNA | 0.48 | 2 | 52912184 | 52912668 |
| TU1353460 | True | 299 | lncRNA | 0.47 | 2 | 52912184 | 52912668 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| leg | leg | coding | upstream | 158267 | 52749848 ~ 52753917 (+) |
| LOC110486774 | sgsm3 | coding | upstream | 180375 | 52705551 ~ 52731809 (+) |
| LOC118938093 | NA | coding | upstream | 224090 | 52685863 ~ 52688094 (+) |
| LOC110486772 | NA | coding | upstream | 295966 | 52612244 ~ 52616224 (+) |
| LOC110486773 | LOC106601688 | coding | upstream | 300015 | 52452794 ~ 52612169 (+) |
| LOC110486782 | LOC106601683 | coding | downstream | 203604 | 53116272 ~ 53122404 (+) |
| LOC110518612 | LOC106601692 | coding | downstream | 220882 | 53133550 ~ 53138298 (+) |
| LOC118938324 | NA | coding | downstream | 315472 | 53228140 ~ 53245488 (+) |
| LOC110538743 | LOC106601732 | coding | downstream | 532667 | 53445335 ~ 53450473 (+) |
| LOC110538736 | LOC106606748 | coding | downstream | 543668 | 53456336 ~ 53458621 (+) |
| G1186767 | NA | non-coding | upstream | 80048 | 52830635 ~ 52832136 (+) |
| G1186749 | NA | non-coding | upstream | 120773 | 52790944 ~ 52791411 (+) |
| G1186747 | NA | non-coding | upstream | 127841 | 52784125 ~ 52784343 (+) |
| G1186741 | NA | non-coding | upstream | 133840 | 52778079 ~ 52778344 (+) |
| G1186726 | NA | non-coding | upstream | 148275 | 52763663 ~ 52763909 (+) |
| G1186801 | NA | non-coding | downstream | 20267 | 52932935 ~ 52933317 (+) |
| G1186806 | NA | non-coding | downstream | 25148 | 52937816 ~ 52938080 (+) |
| G1186889 | NA | non-coding | downstream | 72545 | 52985213 ~ 52985433 (+) |
| G1186892 | NA | non-coding | downstream | 87687 | 53000355 ~ 53000558 (+) |
| G1186893 | NA | non-coding | downstream | 88032 | 53000700 ~ 53000931 (+) |
| LOC110486767 | alkb7 | other | upstream | 522988 | 52374824 ~ 52390015 (+) |
| G1185855 | NA | other | upstream | 556243 | 52274330 ~ 52355941 (+) |
| G1185815 | NA | other | upstream | 735679 | 52175266 ~ 52176505 (+) |
| LOC110486764 | LOC106606789 | other | upstream | 780157 | 52121483 ~ 52139499 (+) |
| LOC110485215 | LOC106606764 | other | upstream | 842569 | 52014531 ~ 52091683 (+) |
| LOC110539012 | LOC106606743 | other | downstream | 91384 | 52907896 ~ 53046938 (+) |
| G1187452 | NA | other | downstream | 1275899 | 54188567 ~ 54198015 (+) |
| G1187390 | NA | other | downstream | 1351398 | 54264066 ~ 54265028 (+) |
| axin2 | LOC105026129 | other | downstream | 1378917 | 54272638 ~ 54300365 (+) |
