G1186806


Basic Information

Item Value
gene id G1186806
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52937816 ~ 52938080 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353478
ATCAGTCGGACTCAGGTAGCATTTCCTGATCTCCTCTTTACTAGAGCTAACTGACTAATAGCGGCTAACACTGATATGCATGATGTAAGCTGTAAGTGAGACAGTGTACTGAAACACAGTCAAACAGGACATGTTCCAAACAGCTGTAATCCTTATCCTTGCATCCTTTACttgtttcctttcctttcccccAGAGCTAACAGCCTAATGGGCTAAGCTAATGGCAAAGAAACACAGATCATTGCTAACGCTAATGGACTAGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353478 True 265 lncRNA 0.43 1 52937816 52938080

Neighbor

gene id symbol gene type direction distance location
leg leg coding upstream 183899 52749848 ~ 52753917 (+)
LOC110486774 sgsm3 coding upstream 206007 52705551 ~ 52731809 (+)
LOC118938093 NA coding upstream 249722 52685863 ~ 52688094 (+)
LOC110486772 NA coding upstream 321598 52612244 ~ 52616224 (+)
LOC110486773 LOC106601688 coding upstream 325647 52452794 ~ 52612169 (+)
LOC110486782 LOC106601683 coding downstream 178192 53116272 ~ 53122404 (+)
LOC110518612 LOC106601692 coding downstream 195470 53133550 ~ 53138298 (+)
LOC118938324 NA coding downstream 290060 53228140 ~ 53245488 (+)
LOC110538743 LOC106601732 coding downstream 507255 53445335 ~ 53450473 (+)
LOC110538736 LOC106606748 coding downstream 518256 53456336 ~ 53458621 (+)
G1186801 NA non-coding upstream 4499 52932935 ~ 52933317 (+)
G1186789 NA non-coding upstream 25148 52912184 ~ 52912668 (+)
G1186767 NA non-coding upstream 105680 52830635 ~ 52832136 (+)
G1186749 NA non-coding upstream 146405 52790944 ~ 52791411 (+)
G1186747 NA non-coding upstream 153473 52784125 ~ 52784343 (+)
G1186889 NA non-coding downstream 47133 52985213 ~ 52985433 (+)
G1186892 NA non-coding downstream 62275 53000355 ~ 53000558 (+)
G1186893 NA non-coding downstream 62620 53000700 ~ 53000931 (+)
G1186924 NA non-coding downstream 145417 53083497 ~ 53083827 (+)
G1186896 NA non-coding downstream 155592 53093672 ~ 53096190 (+)
LOC110486767 alkb7 other upstream 548620 52374824 ~ 52390015 (+)
G1185855 NA other upstream 581875 52274330 ~ 52355941 (+)
G1185815 NA other upstream 761311 52175266 ~ 52176505 (+)
LOC110486764 LOC106606789 other upstream 805789 52121483 ~ 52139499 (+)
LOC110485215 LOC106606764 other upstream 868201 52014531 ~ 52091683 (+)
LOC110539012 LOC106606743 other downstream 65972 52907896 ~ 53046938 (+)
G1187452 NA other downstream 1250487 54188567 ~ 54198015 (+)
G1187390 NA other downstream 1325986 54264066 ~ 54265028 (+)
axin2 LOC105026129 other downstream 1353505 54272638 ~ 54300365 (+)

Expression


Co-expression Network