G1186957


Basic Information

Item Value
gene id G1186957
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52976049 ~ 52976614 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353656
gtgaggagtgaggagaaaggggagaggagaaaagatgagtgaggagtgaggagaaaggggagaggagaaaagatgagtgaggagtgaggagaaaggggagaggagaaaagatgagtgaggagtgaggagaaaggggagaggagaaaagatgagTGAGGAggataaaggggagaggagaaaagatgagtgaggagaaaggggaggagagaaaagatgagtgaggagtgaggagaaaggggagaggggaggagagaaaagatgagtgaggagtgaggagaaaggggagaggagaaaagatgagtgaggagtgaggagaaaggggaggagagaaaagatgagtgaggagtgaggagaaaggggaggagagaaaagatgagtgaggagtgaggagaaaggggaggagagaaaagatgagtgaggagtgaggagaaaggggagaggagaaaagatgagtgaggagtgaggagaaaggggaggagagaaaagatgagtgaggagtgaggagaaaggggaggagagaaaagatgagtgaggagtgaggagaaaggggagaggagaaaagatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353656 True 566 lncRNA 0.50 1 52976049 52976614

Neighbor

gene id symbol gene type direction distance location
LOC110486776 LOC106606809 coding downstream 234494 52730378 ~ 52741555 (-)
LOC110486769 gtf2f1 coding downstream 546015 52415319 ~ 52430034 (-)
LOC110485216 NA coding downstream 644473 52155640 ~ 52331576 (-)
LOC110538721 NA coding downstream 786346 52186557 ~ 52189703 (-)
LOC118938556 NA coding downstream 874092 52100885 ~ 52101957 (-)
LOC110485222 LOC106601739 coding upstream 117052 53093666 ~ 53107919 (-)
LOC110538731 LOC106592182 coding upstream 269780 53246394 ~ 53250376 (-)
LOC110539023 LOC106601728 coding upstream 381746 53358360 ~ 53417730 (-)
LOC118938325 LOC106606746 coding upstream 453418 53430032 ~ 53440075 (-)
LOC110538745 LOC106606750 coding upstream 473940 53450554 ~ 53456191 (-)
G1186856 NA non-coding downstream 51885 52922665 ~ 52924164 (-)
G1186826 NA non-coding downstream 109189 52793600 ~ 52866860 (-)
G1186820 NA non-coding downstream 199027 52776747 ~ 52777022 (-)
G1186736 NA non-coding downstream 204028 52771815 ~ 52772021 (-)
G1186675 leg non-coding downstream 222173 52678774 ~ 52753876 (-)
G1186958 NA non-coding upstream 111 52976725 ~ 52977498 (-)
G1186959 NA non-coding upstream 2375 52978989 ~ 52979219 (-)
G1186961 NA non-coding upstream 4995 52981609 ~ 52982244 (-)
G1186962 LOC106606743 non-coding upstream 6470 52983084 ~ 52983640 (-)
G1186964 NA non-coding upstream 11495 52988109 ~ 52988672 (-)
G1186670 LOC100194703 other downstream 316240 52659331 ~ 52659809 (-)
G1186381 NA other downstream 945389 51924963 ~ 52030660 (-)
G1186216 NA other downstream 964838 52010690 ~ 52011211 (-)
G1186154 NA other downstream 1485808 51489777 ~ 51490241 (-)
G1186075 NA other downstream 1602095 51352309 ~ 51373954 (-)
mosmoa C20H16orf52 other upstream 630410 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 830030 53806640 ~ 54049592 (-)
G1188147 NA other upstream 1472269 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 1488919 54409911 ~ 54470838 (-)
G1188186 LOC106588841 other upstream 1622787 54599401 ~ 54600449 (-)

Expression


Co-expression Network