G1186964


Basic Information

Item Value
gene id G1186964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52988109 ~ 52988672 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353663
aaagagacagagacactaagtgaaaagacagaaagagacagagacactaagtgaaaagacagaaagagacagaaacactaagagaaaagacagaaagagacagaaacactaagagaaaagacagaaagaaatagagacactaagagaaaagacagaaagagacagagacactaagtgaaaagacagaaagagacagagacactaagtgaaaagacagaaagagacagagacactaagtgaaaagacagaaagaaatagagacactaagtgaaaagacagaaagagacagaaacactaagtgaaaagacagaaagagacagagacactaagtgaaaagacagaaagagacagaaacactaagtgaaaagacagaaagaaatagagacactaagtgaaaagacagaaagagacagaaacactaagtgaaaagacagaaagaaatagagacactaagtgaaaagacagaaagaaatagagacactaagtgaaaagacagagagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353663 True 502 lncRNA 0.36 2 52988109 52988672

Neighbor

gene id symbol gene type direction distance location
LOC110486776 LOC106606809 coding downstream 246554 52730378 ~ 52741555 (-)
LOC110486769 gtf2f1 coding downstream 558075 52415319 ~ 52430034 (-)
LOC110485216 NA coding downstream 656533 52155640 ~ 52331576 (-)
LOC110538721 NA coding downstream 798406 52186557 ~ 52189703 (-)
LOC118938556 NA coding downstream 886152 52100885 ~ 52101957 (-)
LOC110485222 LOC106601739 coding upstream 104994 53093666 ~ 53107919 (-)
LOC110538731 LOC106592182 coding upstream 257722 53246394 ~ 53250376 (-)
LOC110539023 LOC106601728 coding upstream 369688 53358360 ~ 53417730 (-)
LOC118938325 LOC106606746 coding upstream 441360 53430032 ~ 53440075 (-)
LOC110538745 LOC106606750 coding upstream 461882 53450554 ~ 53456191 (-)
G1186962 LOC106606743 non-coding downstream 4469 52983084 ~ 52983640 (-)
G1186961 NA non-coding downstream 5865 52981609 ~ 52982244 (-)
G1186959 NA non-coding downstream 8890 52978989 ~ 52979219 (-)
G1186958 NA non-coding downstream 10611 52976725 ~ 52977498 (-)
G1186957 NA non-coding downstream 11495 52976049 ~ 52976614 (-)
G1186965 NA non-coding upstream 3795 52992467 ~ 52992666 (-)
G1186966 NA non-coding upstream 5954 52994626 ~ 52995542 (-)
G1186969 NA non-coding upstream 13177 53001849 ~ 53002099 (-)
G1186970 NA non-coding upstream 14236 53002908 ~ 53003129 (-)
G1186972 NA non-coding upstream 23332 53012004 ~ 53015277 (-)
G1186670 LOC100194703 other downstream 328300 52659331 ~ 52659809 (-)
G1186381 NA other downstream 957449 51924963 ~ 52030660 (-)
G1186216 NA other downstream 976898 52010690 ~ 52011211 (-)
G1186154 NA other downstream 1497868 51489777 ~ 51490241 (-)
G1186075 NA other downstream 1614155 51352309 ~ 51373954 (-)
mosmoa C20H16orf52 other upstream 618352 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 817972 53806640 ~ 54049592 (-)
G1188147 NA other upstream 1460211 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 1476861 54409911 ~ 54470838 (-)
G1188186 LOC106588841 other upstream 1610729 54599401 ~ 54600449 (-)

Expression


Co-expression Network