G1186966


Basic Information

Item Value
gene id G1186966
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52994626 ~ 52995542 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353666
TGAGGGGGTACAGTGTGTCTGTGGTATGTCCTACCTACCTGAGGGGGCGCAGTGTACGGAGCAATCTGAGAACCCTCAGCACCCCCAGAATCTTAGCCCCGCCCGCCATTGACACCACAATGTCAATCAACGACACAAAGACCAGGAAGCCGTCCAACACGTTCCAGCTGCTTTTCAGATATGCCTGTTCCCCTATATACAGGCCCATAGACACCACCtgtagggagggagatagagaggagcaggagggggagATAGGTTGTGAGTGAGGTATGTTATCAACAGGTACGCCCGGTGACCTATATACAATCCCATAGTATAGGAAGAATTGAAAATGGCAGAATTACATTGAACAAAGTTGGTACAATTACAGAATTATTTTTGTTGCAAAAGAGAGCAAGAGTCATGCATCATTTCAATGGGAGAGTTGTGCTTCACCCATATCTCAGGTTAGGAGACTAGTCCCAGATTGACTAGAGGTCTCAGACACATTACATGGTGCATGAGAAATGGAGATAATGAGTGATacagagaagagaaacagagggaggtagagagggagagagggagagagagagagagagagagagacagagagggagaga

Function

NR:

description
PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1I-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353666 True 605 lncRNA 0.48 2 52994626 52995542

Neighbor

gene id symbol gene type direction distance location
LOC110486776 LOC106606809 coding downstream 253071 52730378 ~ 52741555 (-)
LOC110486769 gtf2f1 coding downstream 564592 52415319 ~ 52430034 (-)
LOC110485216 NA coding downstream 663050 52155640 ~ 52331576 (-)
LOC110538721 NA coding downstream 804923 52186557 ~ 52189703 (-)
LOC118938556 NA coding downstream 892669 52100885 ~ 52101957 (-)
LOC110485222 LOC106601739 coding upstream 98124 53093666 ~ 53107919 (-)
LOC110538731 LOC106592182 coding upstream 250852 53246394 ~ 53250376 (-)
LOC110539023 LOC106601728 coding upstream 362818 53358360 ~ 53417730 (-)
LOC118938325 LOC106606746 coding upstream 434490 53430032 ~ 53440075 (-)
LOC110538745 LOC106606750 coding upstream 455012 53450554 ~ 53456191 (-)
G1186965 NA non-coding downstream 1960 52992467 ~ 52992666 (-)
G1186964 NA non-coding downstream 5954 52988109 ~ 52988672 (-)
G1186962 LOC106606743 non-coding downstream 10986 52983084 ~ 52983640 (-)
G1186961 NA non-coding downstream 12382 52981609 ~ 52982244 (-)
G1186959 NA non-coding downstream 15407 52978989 ~ 52979219 (-)
G1186969 NA non-coding upstream 6307 53001849 ~ 53002099 (-)
G1186970 NA non-coding upstream 7366 53002908 ~ 53003129 (-)
G1186972 NA non-coding upstream 16462 53012004 ~ 53015277 (-)
G1186993 LOC106592069 non-coding upstream 47960 53043502 ~ 53046936 (-)
G1187023 NA non-coding upstream 124389 53119931 ~ 53122809 (-)
G1186670 LOC100194703 other downstream 334817 52659331 ~ 52659809 (-)
G1186381 NA other downstream 963966 51924963 ~ 52030660 (-)
G1186216 NA other downstream 983415 52010690 ~ 52011211 (-)
G1186154 NA other downstream 1504385 51489777 ~ 51490241 (-)
G1186075 NA other downstream 1620672 51352309 ~ 51373954 (-)
mosmoa C20H16orf52 other upstream 611482 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 811102 53806640 ~ 54049592 (-)
G1188147 NA other upstream 1453341 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 1469991 54409911 ~ 54470838 (-)
G1188186 LOC106588841 other upstream 1603859 54599401 ~ 54600449 (-)

Expression


Co-expression Network