Gene
RNA
| Item | Value |
|---|---|
| gene id | G1186970 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 53002908 ~ 53003129 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1I-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1353674 | True | 222 | lncRNA | 0.48 | 1 | 53002908 | 53003129 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486776 | LOC106606809 | coding | downstream | 261353 | 52730378 ~ 52741555 (-) |
| LOC110486769 | gtf2f1 | coding | downstream | 572874 | 52415319 ~ 52430034 (-) |
| LOC110485216 | NA | coding | downstream | 671332 | 52155640 ~ 52331576 (-) |
| LOC110538721 | NA | coding | downstream | 813205 | 52186557 ~ 52189703 (-) |
| LOC118938556 | NA | coding | downstream | 900951 | 52100885 ~ 52101957 (-) |
| LOC110485222 | LOC106601739 | coding | upstream | 90537 | 53093666 ~ 53107919 (-) |
| LOC110538731 | LOC106592182 | coding | upstream | 243265 | 53246394 ~ 53250376 (-) |
| LOC110539023 | LOC106601728 | coding | upstream | 355231 | 53358360 ~ 53417730 (-) |
| LOC118938325 | LOC106606746 | coding | upstream | 426903 | 53430032 ~ 53440075 (-) |
| LOC110538745 | LOC106606750 | coding | upstream | 447425 | 53450554 ~ 53456191 (-) |
| G1186969 | NA | non-coding | downstream | 809 | 53001849 ~ 53002099 (-) |
| G1186966 | NA | non-coding | downstream | 7366 | 52994626 ~ 52995542 (-) |
| G1186965 | NA | non-coding | downstream | 10242 | 52992467 ~ 52992666 (-) |
| G1186964 | NA | non-coding | downstream | 14236 | 52988109 ~ 52988672 (-) |
| G1186962 | LOC106606743 | non-coding | downstream | 19268 | 52983084 ~ 52983640 (-) |
| G1186972 | NA | non-coding | upstream | 8875 | 53012004 ~ 53015277 (-) |
| G1186993 | LOC106592069 | non-coding | upstream | 40373 | 53043502 ~ 53046936 (-) |
| G1187023 | NA | non-coding | upstream | 116802 | 53119931 ~ 53122809 (-) |
| G1187704 | NA | non-coding | upstream | 208311 | 53211440 ~ 53211640 (-) |
| G1187711 | NA | non-coding | upstream | 223505 | 53226634 ~ 53226850 (-) |
| G1186670 | LOC100194703 | other | downstream | 343099 | 52659331 ~ 52659809 (-) |
| G1186381 | NA | other | downstream | 972248 | 51924963 ~ 52030660 (-) |
| G1186216 | NA | other | downstream | 991697 | 52010690 ~ 52011211 (-) |
| G1186154 | NA | other | downstream | 1512667 | 51489777 ~ 51490241 (-) |
| G1186075 | NA | other | downstream | 1628954 | 51352309 ~ 51373954 (-) |
| mosmoa | C20H16orf52 | other | upstream | 603895 | 53607021 ~ 53638313 (-) |
| si:ch73-374l24.1 | LOC105026133 | other | upstream | 803515 | 53806640 ~ 54049592 (-) |
| G1188147 | NA | other | upstream | 1445754 | 54448883 ~ 54450020 (-) |
| G1188127 | LOC106601757 | other | upstream | 1462404 | 54409911 ~ 54470838 (-) |
| G1188186 | LOC106588841 | other | upstream | 1596272 | 54599401 ~ 54600449 (-) |
