G1187069


Basic Information

Item Value
gene id G1187069
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 53206722 ~ 53206986 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353800
TCATGCATTAGAACTTCCACATCAGGATCCATTGTAGTTAAAACTTTAGAGTGTACATTCCTATAATGTCTCATTGTGACATCATAGAGCACTTCCTTGGAGAAGCCATAGTAAACATTTCATGCTGTGCCTAACATTCCCCAAACATCTTCTACTGGCTCAGACCTTTTCATTCAGCGAACAGCTACTTTGGGATTAGTAGTAGTTTTATTACATTACATAAATGGCAACCTCCAAAACAGTAGCATGGAGTCCATTCAAACac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353800 True 265 lncRNA 0.38 1 53206722 53206986

Neighbor

gene id symbol gene type direction distance location
LOC110518612 LOC106601692 coding upstream 68424 53133550 ~ 53138298 (+)
LOC110486782 LOC106601683 coding upstream 84318 53116272 ~ 53122404 (+)
LOC110539012 LOC106606743 coding upstream 159784 52907896 ~ 53046938 (+)
leg leg coding upstream 452805 52749848 ~ 52753917 (+)
LOC110486774 sgsm3 coding upstream 474913 52705551 ~ 52731809 (+)
LOC118938324 NA coding downstream 21154 53228140 ~ 53245488 (+)
LOC110538743 LOC106601732 coding downstream 238349 53445335 ~ 53450473 (+)
LOC110538736 LOC106606748 coding downstream 249350 53456336 ~ 53458621 (+)
cdr2a LOC106606747 coding downstream 257224 53464210 ~ 53478284 (+)
trnal-uag-2 NA coding downstream 338497 53545483 ~ 53545564 (+)
G1187054 NA non-coding upstream 12182 53187566 ~ 53194540 (+)
G1187043 NA non-coding upstream 21901 53170112 ~ 53184821 (+)
G1186896 NA non-coding upstream 110532 53093672 ~ 53096190 (+)
G1186924 NA non-coding upstream 122895 53083497 ~ 53083827 (+)
G1186893 NA non-coding upstream 205791 53000700 ~ 53000931 (+)
G1187098 NA non-coding downstream 74522 53281508 ~ 53281755 (+)
G1187099 NA non-coding downstream 75909 53282895 ~ 53283193 (+)
G1187100 NA non-coding downstream 76436 53283422 ~ 53283798 (+)
G1187101 NA non-coding downstream 78127 53285113 ~ 53285348 (+)
G1187151 LOC106601727 non-coding downstream 184872 53391858 ~ 53397031 (+)
LOC110486767 alkb7 other upstream 817526 52374824 ~ 52390015 (+)
G1185855 NA other upstream 850781 52274330 ~ 52355941 (+)
G1185815 NA other upstream 1030217 52175266 ~ 52176505 (+)
LOC110486764 LOC106606789 other upstream 1074695 52121483 ~ 52139499 (+)
G1187452 NA other downstream 981581 54188567 ~ 54198015 (+)
G1187390 NA other downstream 1057080 54264066 ~ 54265028 (+)
axin2 LOC105026129 other downstream 1084599 54272638 ~ 54300365 (+)
G1188344 NA other downstream 1786688 54993674 ~ 54997295 (+)

Expression


Co-expression Network