G1187099


Basic Information

Item Value
gene id G1187099
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 53282895 ~ 53283193 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353830
GTTGTTATTGTTATACTATTCAATTTTAATCTGCTATAGATTTTAAACAGCTCACTAAAATGttgttttatctcaatatcattAAAACTATATCTAAATAACAAAGGATATTTGGTTCAGCCGTGTTGTTATCATTCAGTGCCAATACTACTGTCCCTTTAAGAACCATGACGTCCGACTAGACCATGGAGGCCAAGTCCTTGACCAGGTATGCCCATTCCGCTCTACTATGACCGATCCATGGGTCAGGGGGACCGGTCAGAGTGGTCATGTAGTGGTCAGGTCTCCCTAACAAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353830 True 299 lncRNA 0.41 1 53282895 53283193

Neighbor

gene id symbol gene type direction distance location
LOC118938324 NA coding upstream 37407 53228140 ~ 53245488 (+)
LOC110518612 LOC106601692 coding upstream 144597 53133550 ~ 53138298 (+)
LOC110486782 LOC106601683 coding upstream 160491 53116272 ~ 53122404 (+)
LOC110539012 LOC106606743 coding upstream 235957 52907896 ~ 53046938 (+)
leg leg coding upstream 528978 52749848 ~ 52753917 (+)
LOC110538743 LOC106601732 coding downstream 162142 53445335 ~ 53450473 (+)
LOC110538736 LOC106606748 coding downstream 173143 53456336 ~ 53458621 (+)
cdr2a LOC106606747 coding downstream 181017 53464210 ~ 53478284 (+)
trnal-uag-2 NA coding downstream 262290 53545483 ~ 53545564 (+)
LOC110538749 LOC106580644 coding downstream 342841 53626034 ~ 53634165 (+)
G1187098 NA non-coding upstream 1140 53281508 ~ 53281755 (+)
G1187069 NA non-coding upstream 75909 53206722 ~ 53206986 (+)
G1187054 NA non-coding upstream 88355 53187566 ~ 53194540 (+)
G1187043 NA non-coding upstream 98074 53170112 ~ 53184821 (+)
G1186896 NA non-coding upstream 186705 53093672 ~ 53096190 (+)
G1187100 NA non-coding downstream 229 53283422 ~ 53283798 (+)
G1187101 NA non-coding downstream 1920 53285113 ~ 53285348 (+)
G1187151 LOC106601727 non-coding downstream 108665 53391858 ~ 53397031 (+)
G1187163 NA non-coding downstream 128398 53411591 ~ 53413101 (+)
G1187167 NA non-coding downstream 137581 53420774 ~ 53421042 (+)
LOC110486767 alkb7 other upstream 893699 52374824 ~ 52390015 (+)
G1185855 NA other upstream 926954 52274330 ~ 52355941 (+)
G1185815 NA other upstream 1106390 52175266 ~ 52176505 (+)
LOC110486764 LOC106606789 other upstream 1150868 52121483 ~ 52139499 (+)
G1187452 NA other downstream 905374 54188567 ~ 54198015 (+)
G1187390 NA other downstream 980873 54264066 ~ 54265028 (+)
axin2 LOC105026129 other downstream 1008392 54272638 ~ 54300365 (+)
G1188344 NA other downstream 1710481 54993674 ~ 54997295 (+)

Expression


Co-expression Network