G1187167


Basic Information

Item Value
gene id G1187167
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 53420774 ~ 53421042 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1353906
tcaAAATACTGACTTCCAAATGACTTTTGAGATAtcctaaatagtatttgaacacaGGTCTGACACTAAAATTTGCACTCTCACCCATATCAGCGGCTCCTACTCCGATGTTCCTCATCTTCTGGATGACACCAATCAAGACAGCCATTTTATCAGCTGGTATGACACTGACCAGACAATGAAGTCTGTCCTCCGAACTGTGGGTATTTATGTAGCCAGGATCCTCTTCTGATAATGCTGATATGGGATTAAACTAGTCAAGAgtgaaa

Function

NR:

description
PREDICTED: interferon-induced protein 44-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1353906 True 269 lncRNA 0.41 1 53420774 53421042

Neighbor

gene id symbol gene type direction distance location
LOC118938324 NA coding upstream 175286 53228140 ~ 53245488 (+)
LOC110518612 LOC106601692 coding upstream 282476 53133550 ~ 53138298 (+)
LOC110486782 LOC106601683 coding upstream 298370 53116272 ~ 53122404 (+)
LOC110539012 LOC106606743 coding upstream 373836 52907896 ~ 53046938 (+)
leg leg coding upstream 666857 52749848 ~ 52753917 (+)
LOC110538743 LOC106601732 coding downstream 24293 53445335 ~ 53450473 (+)
LOC110538736 LOC106606748 coding downstream 35294 53456336 ~ 53458621 (+)
cdr2a LOC106606747 coding downstream 43168 53464210 ~ 53478284 (+)
trnal-uag-2 NA coding downstream 124441 53545483 ~ 53545564 (+)
LOC110538749 LOC106580644 coding downstream 204992 53626034 ~ 53634165 (+)
G1187163 NA non-coding upstream 7673 53411591 ~ 53413101 (+)
G1187151 LOC106601727 non-coding upstream 23743 53391858 ~ 53397031 (+)
G1187101 NA non-coding upstream 135426 53285113 ~ 53285348 (+)
G1187100 NA non-coding upstream 136976 53283422 ~ 53283798 (+)
G1187099 NA non-coding upstream 137581 53282895 ~ 53283193 (+)
G1187173 NA non-coding downstream 6376 53427418 ~ 53428040 (+)
G1187192 NA non-coding downstream 21522 53442564 ~ 53442820 (+)
G1187245 LOC106606732 non-coding downstream 220858 53641900 ~ 53653613 (+)
G1187253 NA non-coding downstream 247374 53668416 ~ 53669862 (+)
G1187259 NA non-coding downstream 255467 53676509 ~ 53766636 (+)
LOC110486767 alkb7 other upstream 1031578 52374824 ~ 52390015 (+)
G1185855 NA other upstream 1064833 52274330 ~ 52355941 (+)
G1185815 NA other upstream 1244269 52175266 ~ 52176505 (+)
LOC110486764 LOC106606789 other upstream 1288747 52121483 ~ 52139499 (+)
G1187452 NA other downstream 767525 54188567 ~ 54198015 (+)
G1187390 NA other downstream 843024 54264066 ~ 54265028 (+)
axin2 LOC105026129 other downstream 870543 54272638 ~ 54300365 (+)
G1188344 NA other downstream 1572632 54993674 ~ 54997295 (+)

Expression


Co-expression Network