G1187808



Basic Information


Item Value
gene id G1187808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 53442876 ~ 53443299 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1354665
caagtttaaggagctcctttagcacctcagactcagggACTGCCTgaagggagaaactttgtagctgggcaggggaaaaagagggagaagcatcggggatagtcgcatAAGAAGGGGTGGGatatgaggaaatgttggacgggcaaggaggcatggctgagtcaaataggaatcctgacttaatgaagtggtgattaaaaagCTCAGCCATGTGATTCTTGTCAGtaaacaaccacatcatcaacattaagggacatgggcagctttgaggaggagggtttattctccaggtctttaaccgttttccagaacttcttggggttagacccacagagagagagaactgctccgtaaagtaactaactttggccttccggatagcctgaatgcacttatttctcatttgcctgaatgaGAGCCAGTC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1354665 True 424 lncRNA 0.47 1 53442876 53443299

Neighbor


gene id symbol gene type direction distance location
LOC118938325 LOC106606746 coding downstream 2801 53430032 ~ 53440075 (-)
LOC110539023 LOC106601728 coding downstream 25146 53358360 ~ 53417730 (-)
LOC110538731 LOC106592182 coding downstream 192500 53246394 ~ 53250376 (-)
LOC110485222 LOC106601739 coding downstream 334957 53093666 ~ 53107919 (-)
LOC110486776 LOC106606809 coding downstream 701321 52730378 ~ 52741555 (-)
LOC110538745 LOC106606750 coding upstream 7255 53450554 ~ 53456191 (-)
mfsd13al tm180 coding upstream 15212 53458511 ~ 53464014 (-)
LOC118938683 NA coding upstream 39955 53483254 ~ 53483362 (-)
LOC118938680 NA coding upstream 42487 53485786 ~ 53485904 (-)
LOC118938648 NA coding upstream 43774 53487073 ~ 53487191 (-)
G1187750 NA non-coding downstream 87426 53308264 ~ 53355450 (-)
G1187736 NA non-coding downstream 156030 53286428 ~ 53286846 (-)
G1187735 NA non-coding downstream 156946 53285703 ~ 53285930 (-)
G1187734 NA non-coding downstream 158762 53283420 ~ 53284114 (-)
G1187718 NA non-coding downstream 204181 53238454 ~ 53238695 (-)
G1187821 NA non-coding upstream 38400 53481699 ~ 53481969 (-)
G1187823 NA non-coding upstream 103988 53547287 ~ 53547497 (-)
G1187826 NA non-coding upstream 105800 53549099 ~ 53549316 (-)
G1187779 NA non-coding upstream 249929 53693228 ~ 53697259 (-)
G1187893 cyth3 non-coding upstream 341968 53785267 ~ 53786453 (-)
G1186670 LOC100194703 other downstream 783067 52659331 ~ 52659809 (-)
G1186381 NA other downstream 1412216 51924963 ~ 52030660 (-)
G1186216 NA other downstream 1431665 52010690 ~ 52011211 (-)
G1186154 NA other downstream 1952635 51489777 ~ 51490241 (-)
G1186075 NA other downstream 2068922 51352309 ~ 51373954 (-)
mosmoa C20H16orf52 other upstream 163725 53607021 ~ 53638313 (-)
si:ch73-374l24.1 LOC105026133 other upstream 363345 53806640 ~ 54049592 (-)
G1188147 NA other upstream 1005584 54448883 ~ 54450020 (-)
G1188127 LOC106601757 other upstream 1022234 54409911 ~ 54470838 (-)
G1188186 LOC106588841 other upstream 1156102 54599401 ~ 54600449 (-)

Expression



Co-expression Network