G1187253


Basic Information

Item Value
gene id G1187253
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 53668416 ~ 53669862 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1354017
ACTGtgaactgcgtttattttcagcaaacttaacatgtgtaaatatttgtatgaacacaagattcaacaactgagacaaactcaaggaataatgtgtccctgaacaaaggggggggggggggggtcaaaattaacaaacagtatctggtgtggccaccagctgcattaagtactgcagtgcatctcctcatggactactCCAGATTTGCCAactcttgctgtgagatgttaccccactcttccaccaaggcacctgcaagttcctgggcatttctggggggaatggccctagccctcaccctccgaaccaacaggtcccagacgtgctcaatgggattgaggccattgcggacagtctgaccactgatggagggatggtgccttcctggtgtaacttgggcagttgttaccatcctgtacctgtcccgcaggtgtgatgtttggatgtaccgatcctgtgcaggtgttgttacacgtgatctgccactgcgaggacaatcagctgtccgtcctatctctctgtagcgctgtcttaggcgtctcacagtacggatattgcaatttattgctctggccaAATCTGCAATCCTCATTGATCACACATAAATCAGCATCTCCAAAACAGTTGGATTAATGGTCAAAAACGTTTAAGCTTCCATGAGACGTGGTTATCAGAGTTATGCAGGTTCTGAGTGAAACCAACAACATAATCCGTTCAGGAGAAGAGGAACCTGGTGTATGTCATTATTGCGGGATTTCTGATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1354017 True 764 lncRNA 0.48 2 53668416 53669862

Neighbor

gene id symbol gene type direction distance location
LOC110515633 LOC106601742 coding upstream 6195 53658770 ~ 53662221 (+)
LOC110538749 LOC106580644 coding upstream 34251 53626034 ~ 53634165 (+)
trnal-uag-2 NA coding upstream 122852 53545483 ~ 53545564 (+)
cdr2a LOC106606747 coding upstream 190132 53464210 ~ 53478284 (+)
LOC110538736 LOC106606748 coding upstream 209795 53456336 ~ 53458621 (+)
LOC110486792 LOC106601749 coding downstream 20598 53690460 ~ 53694370 (+)
LOC110486793 LOC106601743 coding downstream 37461 53707323 ~ 53712693 (+)
LOC110486795 NA coding downstream 54285 53724147 ~ 53727783 (+)
cyth3b LOC105026136 coding downstream 73265 53743127 ~ 53791552 (+)
LOC110538759 NA coding downstream 371883 54041745 ~ 54046402 (+)
G1187245 LOC106606732 non-coding upstream 14803 53641900 ~ 53653613 (+)
G1187192 NA non-coding upstream 225596 53442564 ~ 53442820 (+)
G1187173 NA non-coding upstream 240376 53427418 ~ 53428040 (+)
G1187167 NA non-coding upstream 247374 53420774 ~ 53421042 (+)
G1187163 NA non-coding upstream 255315 53411591 ~ 53413101 (+)
G1187259 NA non-coding downstream 6647 53676509 ~ 53766636 (+)
G1187244 NA non-coding downstream 43262 53713124 ~ 53716000 (+)
G1187271 NA non-coding downstream 46444 53716306 ~ 53720111 (+)
G1187322 NA non-coding downstream 185520 53855382 ~ 53855971 (+)
LOC110538743 LOC106601732 other upstream 217952 53445335 ~ 53450473 (+)
LOC110539012 LOC106606743 other upstream 645435 52907896 ~ 53046938 (+)
LOC110486767 alkb7 other upstream 1279220 52374824 ~ 52390015 (+)
G1185855 NA other upstream 1312475 52274330 ~ 52355941 (+)
G1185815 NA other upstream 1491911 52175266 ~ 52176505 (+)
G1187452 NA other downstream 518705 54188567 ~ 54198015 (+)
G1187390 NA other downstream 594204 54264066 ~ 54265028 (+)
axin2 LOC105026129 other downstream 621723 54272638 ~ 54300365 (+)
G1188344 NA other downstream 1323812 54993674 ~ 54997295 (+)
G1188386 NA other downstream 1451399 55121261 ~ 55122619 (+)

Expression


Co-expression Network