G1187271


Basic Information

Item Value
gene id G1187271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 53716306 ~ 53720111 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1354037
taaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatatcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1354037 True 351 lncRNA 0.44 2 53716306 53720111

Neighbor

gene id symbol gene type direction distance location
LOC110486793 LOC106601743 coding upstream 3613 53707323 ~ 53712693 (+)
LOC110486792 LOC106601749 coding upstream 21936 53690460 ~ 53694370 (+)
LOC110515633 LOC106601742 coding upstream 54085 53658770 ~ 53662221 (+)
LOC110538749 LOC106580644 coding upstream 82141 53626034 ~ 53634165 (+)
trnal-uag-2 NA coding upstream 170742 53545483 ~ 53545564 (+)
LOC110486795 NA coding downstream 4036 53724147 ~ 53727783 (+)
cyth3b LOC105026136 coding downstream 23016 53743127 ~ 53791552 (+)
LOC110538759 NA coding downstream 321634 54041745 ~ 54046402 (+)
cep112 LOC106606716 coding downstream 332637 54052748 ~ 54263997 (+)
axin2 LOC105026129 coding downstream 552527 54272638 ~ 54300365 (+)
G1187244 NA non-coding upstream 306 53713124 ~ 53716000 (+)
G1187253 NA non-coding upstream 46444 53668416 ~ 53669862 (+)
G1187245 LOC106606732 non-coding upstream 62693 53641900 ~ 53653613 (+)
G1187192 NA non-coding upstream 273486 53442564 ~ 53442820 (+)
G1187173 NA non-coding upstream 288266 53427418 ~ 53428040 (+)
G1187322 NA non-coding downstream 135271 53855382 ~ 53855971 (+)
G1187372 NA non-coding downstream 265520 53985631 ~ 53986350 (+)
G1187376 NA non-coding downstream 290444 54010555 ~ 54011612 (+)
G1187433 NA non-coding downstream 427087 54147198 ~ 54147698 (+)
LOC110538743 LOC106601732 other upstream 265842 53445335 ~ 53450473 (+)
LOC110539012 LOC106606743 other upstream 693325 52907896 ~ 53046938 (+)
LOC110486767 alkb7 other upstream 1327110 52374824 ~ 52390015 (+)
G1185855 NA other upstream 1360365 52274330 ~ 52355941 (+)
G1185815 NA other upstream 1539801 52175266 ~ 52176505 (+)
G1187452 NA other downstream 468456 54188567 ~ 54198015 (+)
G1187390 NA other downstream 543955 54264066 ~ 54265028 (+)
G1188344 NA other downstream 1273563 54993674 ~ 54997295 (+)
G1188386 NA other downstream 1401150 55121261 ~ 55122619 (+)

Expression


Co-expression Network