Gene
RNA
| Item | Value |
|---|---|
| gene id | G1187893 |
| gene name | cyth3 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 53785267 ~ 53786453 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| cyth3 | Enables guanyl-nucleotide exchange factor activity and phosphatidylinositol-3,4,5-trisphosphate binding activity. Involved in Golgi vesicle transport. Located in cytosol; nucleoplasm; and plasma membrane. Is extrinsic component of cytoplasmic side of plasma membrane. |
| description |
|---|
| PREDICTED: cytohesin-3-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1354763 | True | 452 | lncRNA | 0.51 | 3 | 53785267 | 53786453 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486794 | LOC108245165 | coding | downstream | 59998 | 53713123 ~ 53725269 (-) |
| LOC110486791 | LOC106601672 | coding | downstream | 76997 | 53699239 ~ 53708270 (-) |
| LOC110486790 | LOC106606738 | coding | downstream | 95063 | 53680096 ~ 53690204 (-) |
| LOC110515632 | LOC106601741 | coding | downstream | 106039 | 53663502 ~ 53679228 (-) |
| LOC110486787 | LOC106606732 | coding | downstream | 126441 | 53641894 ~ 53658826 (-) |
| cacng5b | LOC106606721 | coding | upstream | 7123 | 53793576 ~ 53803352 (-) |
| si:ch73-374l24.1 | LOC105026133 | coding | upstream | 20187 | 53806640 ~ 54049592 (-) |
| LOC118938612 | NA | coding | upstream | 639810 | 54426263 ~ 54426404 (-) |
| LOC110538769 | NA | coding | upstream | 639983 | 54426436 ~ 54427451 (-) |
| LOC118938329 | aqp8 | coding | upstream | 950261 | 54736714 ~ 54740723 (-) |
| G1187779 | NA | non-coding | downstream | 88008 | 53693228 ~ 53697259 (-) |
| G1187826 | NA | non-coding | downstream | 235951 | 53549099 ~ 53549316 (-) |
| G1187823 | NA | non-coding | downstream | 237770 | 53547287 ~ 53547497 (-) |
| G1187821 | NA | non-coding | downstream | 303298 | 53481699 ~ 53481969 (-) |
| G1187808 | NA | non-coding | downstream | 341968 | 53442876 ~ 53443299 (-) |
| G1187895 | NA | non-coding | upstream | 5854 | 53792307 ~ 53792865 (-) |
| G1187930 | NA | non-coding | upstream | 91073 | 53877526 ~ 53877991 (-) |
| G1187931 | NA | non-coding | upstream | 92405 | 53878858 ~ 53879075 (-) |
| G1187950 | NA | non-coding | upstream | 151007 | 53937460 ~ 53938325 (-) |
| G1187972 | NA | non-coding | upstream | 200779 | 53987232 ~ 53987767 (-) |
| mosmoa | C20H16orf52 | other | downstream | 147454 | 53607021 ~ 53638313 (-) |
| G1186670 | LOC100194703 | other | downstream | 1125458 | 52659331 ~ 52659809 (-) |
| G1186381 | NA | other | downstream | 1754607 | 51924963 ~ 52030660 (-) |
| G1186216 | NA | other | downstream | 1774056 | 52010690 ~ 52011211 (-) |
| G1186154 | NA | other | downstream | 2295026 | 51489777 ~ 51490241 (-) |
| G1188147 | NA | other | upstream | 662430 | 54448883 ~ 54450020 (-) |
| G1188127 | LOC106601757 | other | upstream | 679080 | 54409911 ~ 54470838 (-) |
| G1188186 | LOC106588841 | other | upstream | 812948 | 54599401 ~ 54600449 (-) |
| LOC110486825 | LOC106606691 | other | upstream | 957972 | 54741479 ~ 54748709 (-) |
