G1187372


Basic Information

Item Value
gene id G1187372
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 53985631 ~ 53986350 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1354149
ggagaggagaggagaggagaggagaggagaggagaggagaggagagttgcgAGGTgattagaggagagagatgaggacatgtcaggaaagatgaggagagataaggagaggtgaggagagatgaggagaggtgaggagagaggtgaggcgAGGTGAGGTGAGtagaggtgagaggtgaggagagaggtgaggagagatgaggagaggtgaggtgagtagaagagagaggtgagtagagcagagaggtgaggagaagtgagtagagcagagaggtgaggagggggaagGTGAGGAgaaaggtgaggagaggtggggtgaggagaggtgaggagagagttgaggagaggtgagtagaggagagagatgtggagagagttgaggaaacacacagccataacacaagcacagccatataacacagccataacacacacacagccataacacacagccataacacaaacacagccatataacacaacacacagccataacacacacacatccatataacaaacacagccatataacacacacagccatataacacagccataacacacacagagccatttaacacacacagagccatataacacacacacagccatataacacacacagccataacacacaggcataacacacagcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1354149 True 653 lncRNA 0.50 2 53985631 53986350

Neighbor

gene id symbol gene type direction distance location
cyth3b LOC105026136 coding upstream 194079 53743127 ~ 53791552 (+)
LOC110486795 NA coding upstream 257848 53724147 ~ 53727783 (+)
LOC110486793 LOC106601743 coding upstream 272938 53707323 ~ 53712693 (+)
LOC110486792 LOC106601749 coding upstream 291261 53690460 ~ 53694370 (+)
LOC110515633 LOC106601742 coding upstream 323410 53658770 ~ 53662221 (+)
LOC110538759 NA coding downstream 55395 54041745 ~ 54046402 (+)
cep112 LOC106606716 coding downstream 66398 54052748 ~ 54263997 (+)
axin2 LOC105026129 coding downstream 286288 54272638 ~ 54300365 (+)
tex2 LOC106599243 coding downstream 399155 54385505 ~ 54425642 (+)
LOC110538772 ern1 coding downstream 441215 54427565 ~ 54455175 (+)
G1187322 NA non-coding upstream 129660 53855382 ~ 53855971 (+)
G1187259 NA non-coding upstream 218995 53676509 ~ 53766636 (+)
G1187271 NA non-coding upstream 265520 53716306 ~ 53720111 (+)
G1187244 NA non-coding upstream 269631 53713124 ~ 53716000 (+)
G1187376 NA non-coding downstream 24205 54010555 ~ 54011612 (+)
G1187433 NA non-coding downstream 160848 54147198 ~ 54147698 (+)
G1187452 NA non-coding downstream 202217 54188567 ~ 54198015 (+)
G1187486 NA non-coding downstream 282969 54269319 ~ 54269899 (+)
G1187524 NA non-coding downstream 361652 54348002 ~ 54348250 (+)
LOC110538743 LOC106601732 other upstream 535167 53445335 ~ 53450473 (+)
LOC110539012 LOC106606743 other upstream 962650 52907896 ~ 53046938 (+)
LOC110486767 alkb7 other upstream 1596435 52374824 ~ 52390015 (+)
G1185855 NA other upstream 1629690 52274330 ~ 52355941 (+)
G1185815 NA other upstream 1809126 52175266 ~ 52176505 (+)
G1187390 NA other downstream 277716 54264066 ~ 54265028 (+)
G1188344 NA other downstream 1007324 54993674 ~ 54997295 (+)
G1188386 NA other downstream 1134911 55121261 ~ 55122619 (+)

Expression


Co-expression Network