Gene
RNA
| Item | Value |
|---|---|
| gene id | G1188011 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 54101728 ~ 54102534 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1354889 | False | 759 | lncRNA | 0.36 | 2 | 54101728 | 54102534 |
| TU1354891 | True | 285 | lncRNA | 0.37 | 2 | 54101728 | 54102534 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch73-374l24.1 | LOC105026133 | coding | downstream | 52136 | 53806640 ~ 54049592 (-) |
| cacng5b | LOC106606721 | coding | downstream | 298376 | 53793576 ~ 53803352 (-) |
| LOC110486794 | LOC108245165 | coding | downstream | 376459 | 53713123 ~ 53725269 (-) |
| LOC110486791 | LOC106601672 | coding | downstream | 393458 | 53699239 ~ 53708270 (-) |
| LOC110486790 | LOC106606738 | coding | downstream | 411524 | 53680096 ~ 53690204 (-) |
| LOC118938612 | NA | coding | upstream | 323729 | 54426263 ~ 54426404 (-) |
| LOC110538769 | NA | coding | upstream | 323902 | 54426436 ~ 54427451 (-) |
| LOC118938329 | aqp8 | coding | upstream | 634180 | 54736714 ~ 54740723 (-) |
| LOC110486825 | LOC106606691 | coding | upstream | 638945 | 54741479 ~ 54748709 (-) |
| LOC110485228 | LOC106606689 | coding | upstream | 710588 | 54813122 ~ 54831352 (-) |
| G1187986 | NA | non-coding | downstream | 68636 | 54025475 ~ 54033092 (-) |
| G1187975 | NA | non-coding | downstream | 94077 | 54007378 ~ 54007651 (-) |
| G1187972 | NA | non-coding | downstream | 113961 | 53987232 ~ 53987767 (-) |
| G1187950 | NA | non-coding | downstream | 163403 | 53937460 ~ 53938325 (-) |
| G1187931 | NA | non-coding | downstream | 222653 | 53878858 ~ 53879075 (-) |
| G1188025 | NA | non-coding | upstream | 46518 | 54149052 ~ 54149438 (-) |
| G1188033 | NA | non-coding | upstream | 65452 | 54167986 ~ 54168328 (-) |
| G1188073 | NA | non-coding | upstream | 161502 | 54264036 ~ 54265024 (-) |
| G1188082 | LOC106606676 | non-coding | upstream | 187771 | 54290305 ~ 54290605 (-) |
| G1188083 | NA | non-coding | upstream | 188301 | 54290835 ~ 54291127 (-) |
| mosmoa | C20H16orf52 | other | downstream | 463915 | 53607021 ~ 53638313 (-) |
| G1186670 | LOC100194703 | other | downstream | 1441919 | 52659331 ~ 52659809 (-) |
| G1186381 | NA | other | downstream | 2071068 | 51924963 ~ 52030660 (-) |
| G1188147 | NA | other | upstream | 346349 | 54448883 ~ 54450020 (-) |
| G1188127 | LOC106601757 | other | upstream | 362999 | 54409911 ~ 54470838 (-) |
| G1188186 | LOC106588841 | other | upstream | 496867 | 54599401 ~ 54600449 (-) |
