Gene
RNA
| Item | Value |
|---|---|
| gene id | G1187486 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 54269319 ~ 54269899 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1354280 | True | 581 | lncRNA | 0.45 | 1 | 54269319 | 54269899 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cep112 | LOC106606716 | coding | upstream | 5322 | 54052748 ~ 54263997 (+) |
| LOC110538759 | NA | coding | upstream | 222917 | 54041745 ~ 54046402 (+) |
| cyth3b | LOC105026136 | coding | upstream | 477767 | 53743127 ~ 53791552 (+) |
| LOC110486795 | NA | coding | upstream | 541536 | 53724147 ~ 53727783 (+) |
| LOC110486793 | LOC106601743 | coding | upstream | 556626 | 53707323 ~ 53712693 (+) |
| axin2 | LOC105026129 | coding | downstream | 2739 | 54272638 ~ 54300365 (+) |
| tex2 | LOC106599243 | coding | downstream | 115606 | 54385505 ~ 54425642 (+) |
| LOC110538772 | ern1 | coding | downstream | 157666 | 54427565 ~ 54455175 (+) |
| samd9l | LOC106601757 | coding | downstream | 187656 | 54457555 ~ 54544268 (+) |
| LOC118936451 | LOC106606683 | coding | downstream | 295389 | 54565288 ~ 54592971 (+) |
| G1187452 | NA | non-coding | upstream | 71304 | 54188567 ~ 54198015 (+) |
| G1187433 | NA | non-coding | upstream | 121621 | 54147198 ~ 54147698 (+) |
| G1187376 | NA | non-coding | upstream | 257707 | 54010555 ~ 54011612 (+) |
| G1187372 | NA | non-coding | upstream | 282969 | 53985631 ~ 53986350 (+) |
| G1187322 | NA | non-coding | upstream | 413348 | 53855382 ~ 53855971 (+) |
| G1187524 | NA | non-coding | downstream | 78103 | 54348002 ~ 54348250 (+) |
| G1187532 | NA | non-coding | downstream | 100713 | 54370612 ~ 54372602 (+) |
| G1187571 | NA | non-coding | downstream | 332342 | 54602241 ~ 54602568 (+) |
| LOC118938328 | LOC106601771 | non-coding | downstream | 340945 | 54599341 ~ 54613436 (+) |
| G1187390 | NA | other | upstream | 4291 | 54264066 ~ 54265028 (+) |
| LOC110538743 | LOC106601732 | other | upstream | 818855 | 53445335 ~ 53450473 (+) |
| LOC110539012 | LOC106606743 | other | upstream | 1246338 | 52907896 ~ 53046938 (+) |
| LOC110486767 | alkb7 | other | upstream | 1880123 | 52374824 ~ 52390015 (+) |
| G1188344 | NA | other | downstream | 723775 | 54993674 ~ 54997295 (+) |
| G1188386 | NA | other | downstream | 851362 | 55121261 ~ 55122619 (+) |
| LOC110539040 | LOC106601832 | other | downstream | 1070825 | 55340702 ~ 55394765 (+) |
| G1189040 | NA | other | downstream | 1668573 | 55938472 ~ 55939357 (+) |
