G1187524


Basic Information

Item Value
gene id G1187524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54348002 ~ 54348250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1354336
aaacacagaaataggaaaaacatagaaacacaaacaaagactgcccaccccaactcacgccctgaccatactaaataaagtcaaaacaaaggaaataaaggtcagaacgtgacaacgccagtcacgtggtctgtggttgtgaagccggttggatgtactgccaaattttctaaaacgacgttggaggcggcttatggtagagaaatgaacattcaattatgtggcaacagctctggtcctgcagtcagc

Function

NR:

description
hypothetical protein EH28_03751

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1354336 True 249 lncRNA 0.44 1 54348002 54348250

Neighbor

gene id symbol gene type direction distance location
axin2 LOC105026129 coding upstream 47637 54272638 ~ 54300365 (+)
cep112 LOC106606716 coding upstream 84005 54052748 ~ 54263997 (+)
LOC110538759 NA coding upstream 301600 54041745 ~ 54046402 (+)
cyth3b LOC105026136 coding upstream 556450 53743127 ~ 53791552 (+)
LOC110486795 NA coding upstream 620219 53724147 ~ 53727783 (+)
tex2 LOC106599243 coding downstream 37255 54385505 ~ 54425642 (+)
LOC110538772 ern1 coding downstream 79315 54427565 ~ 54455175 (+)
samd9l LOC106601757 coding downstream 109305 54457555 ~ 54544268 (+)
LOC118936451 LOC106606683 coding downstream 217038 54565288 ~ 54592971 (+)
LOC118938328 LOC106601771 coding downstream 251091 54599341 ~ 54613436 (+)
G1187486 NA non-coding upstream 78103 54269319 ~ 54269899 (+)
G1187452 NA non-coding upstream 149987 54188567 ~ 54198015 (+)
G1187433 NA non-coding upstream 200304 54147198 ~ 54147698 (+)
G1187376 NA non-coding upstream 336390 54010555 ~ 54011612 (+)
G1187372 NA non-coding upstream 361652 53985631 ~ 53986350 (+)
G1187532 NA non-coding downstream 22362 54370612 ~ 54372602 (+)
G1187571 NA non-coding downstream 253991 54602241 ~ 54602568 (+)
G1187579 NA non-coding downstream 300308 54648558 ~ 54648781 (+)
G1187390 NA other upstream 82974 54264066 ~ 54265028 (+)
LOC110538743 LOC106601732 other upstream 897538 53445335 ~ 53450473 (+)
LOC110539012 LOC106606743 other upstream 1325021 52907896 ~ 53046938 (+)
G1188344 NA other downstream 645424 54993674 ~ 54997295 (+)
G1188386 NA other downstream 773011 55121261 ~ 55122619 (+)
LOC110539040 LOC106601832 other downstream 992474 55340702 ~ 55394765 (+)
G1189040 NA other downstream 1590222 55938472 ~ 55939357 (+)
G1189738 NA other downstream 2488166 56836416 ~ 56836996 (+)

Expression


Co-expression Network