Gene
RNA
| Item | Value |
|---|---|
| gene id | G1187532 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 54370612 ~ 54372602 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1354345 | True | 552 | lncRNA | 0.47 | 2 | 54370612 | 54372602 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| axin2 | LOC105026129 | coding | upstream | 70247 | 54272638 ~ 54300365 (+) |
| cep112 | LOC106606716 | coding | upstream | 106615 | 54052748 ~ 54263997 (+) |
| LOC110538759 | NA | coding | upstream | 324210 | 54041745 ~ 54046402 (+) |
| cyth3b | LOC105026136 | coding | upstream | 579060 | 53743127 ~ 53791552 (+) |
| LOC110486795 | NA | coding | upstream | 642829 | 53724147 ~ 53727783 (+) |
| tex2 | LOC106599243 | coding | downstream | 12903 | 54385505 ~ 54425642 (+) |
| LOC110538772 | ern1 | coding | downstream | 54963 | 54427565 ~ 54455175 (+) |
| samd9l | LOC106601757 | coding | downstream | 84953 | 54457555 ~ 54544268 (+) |
| LOC118936451 | LOC106606683 | coding | downstream | 192686 | 54565288 ~ 54592971 (+) |
| LOC118938328 | LOC106601771 | coding | downstream | 226739 | 54599341 ~ 54613436 (+) |
| G1187524 | NA | non-coding | upstream | 22362 | 54348002 ~ 54348250 (+) |
| G1187486 | NA | non-coding | upstream | 100713 | 54269319 ~ 54269899 (+) |
| G1187452 | NA | non-coding | upstream | 172597 | 54188567 ~ 54198015 (+) |
| G1187433 | NA | non-coding | upstream | 222914 | 54147198 ~ 54147698 (+) |
| G1187376 | NA | non-coding | upstream | 359000 | 54010555 ~ 54011612 (+) |
| G1187571 | NA | non-coding | downstream | 229639 | 54602241 ~ 54602568 (+) |
| G1187579 | NA | non-coding | downstream | 275956 | 54648558 ~ 54648781 (+) |
| G1187582 | NA | non-coding | downstream | 285104 | 54657706 ~ 54658404 (+) |
| G1187390 | NA | other | upstream | 105584 | 54264066 ~ 54265028 (+) |
| LOC110538743 | LOC106601732 | other | upstream | 920148 | 53445335 ~ 53450473 (+) |
| LOC110539012 | LOC106606743 | other | upstream | 1347631 | 52907896 ~ 53046938 (+) |
| G1188344 | NA | other | downstream | 621072 | 54993674 ~ 54997295 (+) |
| G1188386 | NA | other | downstream | 748659 | 55121261 ~ 55122619 (+) |
| LOC110539040 | LOC106601832 | other | downstream | 968122 | 55340702 ~ 55394765 (+) |
| G1189040 | NA | other | downstream | 1565870 | 55938472 ~ 55939357 (+) |
| G1189738 | NA | other | downstream | 2463814 | 56836416 ~ 56836996 (+) |
