G1188128



Basic Information


Item Value
gene id G1188128
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54457610 ~ 54549633 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1355035
TTCCAATACTAAGTAGCTAAATAAATCGTCAAATTAAGTTTAATCTGTTGTCTCCAAGCAAAGTAAATATTGGGCTTACCAATGGGGCGGGTGCAGATAAACCAGACGTTGGCGGGGATATTTTCCTCTGCAAAAAAAATATACTCCAGTTTTAGATTGCAGAGATAAGACTTCAATATAGTTTTTTTCCATTCAGCAGATACACTTTACACCAAACAGAAATAAAGGGCTAAGAATGTGTCTTTCCTTTGTTGGAGAGCACTCTCAACAAGCGTAGCCTATAATTGATATAGTTCTCACCTCTTTAAATTGTTTCATTGCCAACATAAATATGTTTAGTTCTTAATTCGCCGCACGTCTTTCATGCTTTAGAATATTCGGTGTGATAGAAGACGACTCTTTTCAACTGGTAGATTTCTGCTGCTGTACTAGATAGCTGGTGTCGAATGCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1355035 True 451 lncRNA 0.37 2 54457610 54549633

Neighbor


gene id symbol gene type direction distance location
LOC110538769 NA coding downstream 30159 54426436 ~ 54427451 (-)
LOC118938612 NA coding downstream 31206 54426263 ~ 54426404 (-)
si:ch73-374l24.1 LOC105026133 coding downstream 408018 53806640 ~ 54049592 (-)
cacng5b LOC106606721 coding downstream 654258 53793576 ~ 53803352 (-)
LOC110486794 LOC108245165 coding downstream 732341 53713123 ~ 53725269 (-)
LOC118938329 aqp8 coding upstream 187081 54736714 ~ 54740723 (-)
LOC110486825 LOC106606691 coding upstream 191846 54741479 ~ 54748709 (-)
LOC110485228 LOC106606689 coding upstream 263489 54813122 ~ 54831352 (-)
LOC110486827 LOC106606694 coding upstream 283477 54809618 ~ 54889445 (-)
trnaa-ugc-61 NA coding upstream 305902 54855535 ~ 54855610 (-)
G1188146 LOC106601756 non-coding downstream 2441 54453146 ~ 54455169 (-)
G1188115 NA non-coding downstream 59980 54397276 ~ 54397630 (-)
G1188106 NA non-coding downstream 109280 54348130 ~ 54348330 (-)
G1188083 NA non-coding downstream 166483 54290835 ~ 54291127 (-)
G1188176 NA non-coding upstream 24267 54573900 ~ 54641495 (-)
G1188189 NA non-coding upstream 58865 54608498 ~ 54610515 (-)
G1188197 NA non-coding upstream 98650 54648283 ~ 54648896 (-)
G1188198 NA non-coding upstream 107237 54656870 ~ 54657166 (-)
G1188204 NA non-coding upstream 140192 54689825 ~ 54691458 (-)
G1188147 NA other downstream 7590 54448883 ~ 54450020 (-)
mosmoa C20H16orf52 other downstream 819797 53607021 ~ 53638313 (-)
G1186670 LOC100194703 other downstream 1797801 52659331 ~ 52659809 (-)
G1186216 NA other downstream 2446399 52010690 ~ 52011211 (-)
G1188186 LOC106588841 other upstream 49768 54599401 ~ 54600449 (-)
LOC110486836 LOC106606701 other upstream 473015 55022619 ~ 55026465 (-)
LOC110516592 LOC106601772 other upstream 661866 55209614 ~ 55242150 (-)

Expression



Co-expression Network