G1188197


Basic Information

Item Value
gene id G1188197
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54648283 ~ 54648896 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355114
cttccacaagctgcccattcctcctgacagaactggtgtaactgagtcaggtatgtaggcctccttgctcgcgcacgctttttcagttctgcctacaaactttctatgggattaaggtcagggctttgtgatggccactccaatatcttgactttgttgtccttaagccattttgccacaactttggaagtatgcttggggtcattgtccatttggaagacccatttgcgaccaagctttaacttcctgactgatgtcttgagttgttgcttcaatatatccacacaattttctttcctcatgatgccatctattttgtgaagtgcaccagtccctcctgcagcaaagcacccccacaacatgatgctaccaccccgtgcttcacggttgggatggtgttctttggcttgcaagcctccccctttttcctccaaatataacgatggtcattatggccaaacagttctatttttgtttcatcagacaagaggacatttctccaaaaaaagtacaatctttgtccccatgtgcagttgcaaaccgtagtctggcttttttatggcggttttggagcagtggcttcttccttgccgagtggcctttcaggttatgtc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355114 True 614 lncRNA 0.46 1 54648283 54648896

Neighbor

gene id symbol gene type direction distance location
LOC110538769 NA coding downstream 220832 54426436 ~ 54427451 (-)
LOC118938612 NA coding downstream 221879 54426263 ~ 54426404 (-)
si:ch73-374l24.1 LOC105026133 coding downstream 598691 53806640 ~ 54049592 (-)
cacng5b LOC106606721 coding downstream 844931 53793576 ~ 53803352 (-)
LOC110486794 LOC108245165 coding downstream 923014 53713123 ~ 53725269 (-)
LOC118938329 aqp8 coding upstream 87818 54736714 ~ 54740723 (-)
LOC110486825 LOC106606691 coding upstream 92583 54741479 ~ 54748709 (-)
LOC110485228 LOC106606689 coding upstream 164226 54813122 ~ 54831352 (-)
LOC110486827 LOC106606694 coding upstream 184214 54809618 ~ 54889445 (-)
trnaa-ugc-61 NA coding upstream 206639 54855535 ~ 54855610 (-)
G1188176 NA non-coding downstream 6788 54573900 ~ 54641495 (-)
G1188189 NA non-coding downstream 37768 54608498 ~ 54610515 (-)
G1188130 NA non-coding downstream 55163 54541945 ~ 54593120 (-)
G1188128 NA non-coding downstream 98650 54457610 ~ 54549633 (-)
G1188161 NA non-coding downstream 123638 54523698 ~ 54524645 (-)
G1188198 NA non-coding upstream 7974 54656870 ~ 54657166 (-)
G1188204 NA non-coding upstream 40929 54689825 ~ 54691458 (-)
G1188232 NA non-coding upstream 113137 54762033 ~ 54762940 (-)
G1188235 NA non-coding upstream 116669 54765565 ~ 54767157 (-)
G1188252 LOC106606653 non-coding upstream 152053 54800949 ~ 54802533 (-)
G1188186 LOC106588841 other downstream 47834 54599401 ~ 54600449 (-)
G1188127 LOC106601757 other downstream 177445 54409911 ~ 54470838 (-)
G1188147 NA other downstream 198263 54448883 ~ 54450020 (-)
mosmoa C20H16orf52 other downstream 1010470 53607021 ~ 53638313 (-)
LOC110486836 LOC106606701 other upstream 373752 55022619 ~ 55026465 (-)
LOC110516592 LOC106601772 other upstream 562603 55209614 ~ 55242150 (-)
LOC110485238 LOC106601829 other upstream 785920 55434816 ~ 55509918 (-)

Expression


Co-expression Network