XLOC_030852 (zgc:158343)


Basic Information

Item Value
gene id XLOC_030852
gene name zgc:158343
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 9823754 ~ 9824908 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00060002
ACAAGAGCAAATACCGCATTCTAGAACCGACCTGAACTAACAATGCTGACCAGATCAGACAGTCTGATTTTCACATTACCATCAAACAActtcttccagccacaaccgcAGTTCGGCTTCGGATCGATGATGCCGCGCAACACACAGCCGGAAATCTTCACTTTCGAGCGGATCCCTGAGCCGCAGCAGCCCGGCGCTTTCCCGCAGCGCGGAGCTCCAGTTCGGCCGCGCAAGAGGAACACAAGGGTCATGTACCCAGCCAAAGTGCGCAAATATCTCCCACCAGCCGAAAAGAGCCCGGTTAAACGCTGGCTGCTCATATTATGCATGGTGGTTTTCATGCAGATCTACACCGAGGAGGGATCCGTGGAGACTCCGCAGACTGAGGCGTCTGCATACAACGTGCTCCCTTTCCAGTCTGCTGAAGAGCAAGCTAAACAAATGATGAGCAACTGCCCTGAGGACTTCATCCAGATGCCATACGAGTCCTCCAGCTCCAGGAACGGGGAGAAAAAGGACAGTTTCTGGCTCCTAAACACTACATGCCCGAGCTCCGTATTGGAGGAGGAGGATTTCACCGCGATCTACCAGCAGCAGCAGAGCCGGAGAAATGGATATGTGGTGGCTCTTCTCTATCCAGTCTATCATAGACTTGGTTCTGAGAACTGAACGAACTCTTAAACAAGTCTGTGGACTTTTTACTCCAAGCCTTTTTGGAAAAACGAGCTCCTGTGGTGCTCAAAACTATAAGACTACGGTGTTTTAGAGCGAAGTGAAGTAAACACAAACTGAGGAGACGTTTGATGGACTTGAATGACGAACAAAAAGCTTACGGAATGATACTTGAAAGGCTTTAGATTTAGCTTACTTGAATATGTTTCGCTTGAAGGGTAGATATTTAGCATAGCCTTGCAAGTAGAGCTGTTTTTTTAGATACAGAAGTCTGAAATCATGAGGACGTCGCGATGATCGTTTGTGTTGCTGAAAGCTGAAATAATACTTGAATCTCATATTGACGACTTCCTGTGTGTTATAAATGAACATATGTATGATGAAGTATTCattaactatttattatttaatgctatttattgttattatttacttatttattttgttattgtgaaATAAATTGATATTTGCAACTTCAACTCT

Function

symbol description
zgc:158343 Predicted to act upstream of or within negative regulation of apoptotic process. Is expressed in myotome. Orthologous to human IER3 (immediate early response 3).

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061201-9 Predicted to act upstream of or within negative regulation of apoptotic process. Is expressed in myotome. Orthologous to human IER3 (immediate early response 3).

Ensembl:

ensembl_id ENSDARG00000099411

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00060002 True 1155 mRNA 0.45 1 9823754 9824908

Neighbor

gene id symbol gene type direction distance location
XLOC_030851 ddr2l coding downstream 30481 9699922 ~ 9793273 (-)
XLOC_030850 si:ch211-193c2.2 coding downstream 145679 9677305 ~ 9678075 (-)
XLOC_030849 sh2b3 coding downstream 198295 9556943 ~ 9625459 (-)
XLOC_030848 gak coding downstream 282984 9441198 ~ 9540770 (-)
XLOC_030847 lrp13 coding downstream 606996 9179578 ~ 9216758 (-)
XLOC_030853 NA coding upstream 55280 9880188 ~ 9882404 (-)
XLOC_030854 tor4ab coding upstream 69235 9894143 ~ 9948497 (-)
XLOC_030855 WDR31 coding upstream 158442 9983350 ~ 10002260 (-)
XLOC_030856 CR936408.1 coding upstream 178550 10003458 ~ 10007897 (-)
XLOC_030857 CR936408.2 coding upstream 187014 10011922 ~ 10012971 (-)
XLOC_030846 AL845369.2 non-coding downstream 644318 9173538 ~ 9179436 (-)
XLOC_030845 AL845369.1 non-coding downstream 653220 9166395 ~ 9170534 (-)
XLOC_030844 NA non-coding downstream 676977 9144367 ~ 9146777 (-)
XLOC_030843 NA non-coding downstream 696195 9107085 ~ 9127559 (-)
XLOC_030840 NA non-coding downstream 792003 9030240 ~ 9031751 (-)
XLOC_030859 NA non-coding upstream 390606 10215514 ~ 10217606 (-)
XLOC_030861 NA non-coding upstream 664029 10488937 ~ 10500797 (-)
XLOC_030862 BX511089.3 non-coding upstream 682918 10507826 ~ 10508814 (-)
XLOC_030863 CR790366.3 non-coding upstream 895986 10720894 ~ 10724665 (-)

Expression


Co-expression Network