Gene
RNA
| Item | Value |
|---|---|
| gene id | G1187582 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 54657706 ~ 54658404 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1354402 | True | 699 | lncRNA | 0.48 | 1 | 54657706 | 54658404 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938094 | NA | coding | upstream | 1843 | 54655147 ~ 54655863 (+) |
| LOC110515422 | LOC106606686 | coding | upstream | 17964 | 54614037 ~ 54639742 (+) |
| LOC118938328 | LOC106601771 | coding | upstream | 44270 | 54599341 ~ 54613436 (+) |
| LOC118936451 | LOC106606683 | coding | upstream | 64735 | 54565288 ~ 54592971 (+) |
| samd9l | LOC106601757 | coding | upstream | 113438 | 54457555 ~ 54544268 (+) |
| LOC110486813 | LOC106606687 | coding | downstream | 42701 | 54701105 ~ 54710557 (+) |
| LOC110486816 | LOC106606673 | coding | downstream | 59206 | 54717610 ~ 54720302 (+) |
| LOC110486811 | LOC106601768 | coding | downstream | 62257 | 54720661 ~ 54731365 (+) |
| LOC110485227 | LOC106606653 | coding | downstream | 97478 | 54755882 ~ 54810128 (+) |
| LOC110486830 | LOC106606695 | coding | downstream | 249164 | 54907568 ~ 54925441 (+) |
| G1187579 | NA | non-coding | upstream | 8925 | 54648558 ~ 54648781 (+) |
| G1187571 | NA | non-coding | upstream | 55138 | 54602241 ~ 54602568 (+) |
| LOC110538772 | ern1 | non-coding | upstream | 224560 | 54427565 ~ 54455175 (+) |
| G1187532 | NA | non-coding | upstream | 285104 | 54370612 ~ 54372602 (+) |
| G1187583 | NA | non-coding | downstream | 1881 | 54660285 ~ 54660565 (+) |
| G1187584 | NA | non-coding | downstream | 3421 | 54661825 ~ 54662314 (+) |
| G1187585 | NA | non-coding | downstream | 14155 | 54672559 ~ 54672973 (+) |
| G1187586 | NA | non-coding | downstream | 15879 | 54674283 ~ 54674486 (+) |
| G1187587 | NA | non-coding | downstream | 22881 | 54681285 ~ 54681503 (+) |
| axin2 | LOC105026129 | other | upstream | 357393 | 54272638 ~ 54300365 (+) |
| G1187390 | NA | other | upstream | 392678 | 54264066 ~ 54265028 (+) |
| G1187452 | NA | other | upstream | 459691 | 54188567 ~ 54198015 (+) |
| LOC110538743 | LOC106601732 | other | upstream | 1207242 | 53445335 ~ 53450473 (+) |
| LOC110539012 | LOC106606743 | other | upstream | 1634725 | 52907896 ~ 53046938 (+) |
| G1188344 | NA | other | downstream | 335270 | 54993674 ~ 54997295 (+) |
| G1188386 | NA | other | downstream | 462857 | 55121261 ~ 55122619 (+) |
| LOC110539040 | LOC106601832 | other | downstream | 682320 | 55340702 ~ 55394765 (+) |
| G1189040 | NA | other | downstream | 1280068 | 55938472 ~ 55939357 (+) |
| G1189738 | NA | other | downstream | 2178012 | 56836416 ~ 56836996 (+) |
