G1187598


Basic Information

Item Value
gene id G1187598
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54735047 ~ 54735375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1354423
TTTGTTTATAAAAATCTTTTAATCTCAAATAGTCACAGGAAAATAGTGTCCCCAAAATATACTGGGAAAACAAAAAAGGTGAAAATATAACAATAATGGTGATAATATATTCAACAACAATGGTGATAATATAACAGTAATGGTGATAATATAACAACAACAATGGTGATAATATAACAATTATGGTGATAATATATTCAACAACAATGGTGATAATATAgcaataatgatgataataataacaacaatggtGATAATATAACAATAATGgtgataatatacagtaccagtaaaacgtttagacacacctactcatttaagaatttctc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1354423 True 329 lncRNA 0.26 1 54735047 54735375

Neighbor

gene id symbol gene type direction distance location
LOC110486811 LOC106601768 coding upstream 3682 54720661 ~ 54731365 (+)
LOC110486816 LOC106606673 coding upstream 14745 54717610 ~ 54720302 (+)
LOC110486813 LOC106606687 coding upstream 24490 54701105 ~ 54710557 (+)
LOC118938094 NA coding upstream 79184 54655147 ~ 54655863 (+)
LOC110515422 LOC106606686 coding upstream 95305 54614037 ~ 54639742 (+)
LOC110485227 LOC106606653 coding downstream 20507 54755882 ~ 54810128 (+)
LOC110486830 LOC106606695 coding downstream 172193 54907568 ~ 54925441 (+)
narfl LOC106606697 coding downstream 190192 54925567 ~ 54933422 (+)
LOC110486846 LOC106601652 coding downstream 203645 54939020 ~ 54940491 (+)
LOC110539040 LOC106601832 coding downstream 605327 55340702 ~ 55394765 (+)
G1187597 NA non-coding upstream 1454 54733092 ~ 54733593 (+)
G1187587 NA non-coding upstream 53544 54681285 ~ 54681503 (+)
G1187586 NA non-coding upstream 60561 54674283 ~ 54674486 (+)
G1187585 NA non-coding upstream 62074 54672559 ~ 54672973 (+)
G1187584 NA non-coding upstream 72733 54661825 ~ 54662314 (+)
G1187601 aqp8 non-coding downstream 3844 54739219 ~ 54742448 (+)
G1187614 NA non-coding downstream 26741 54762116 ~ 54762918 (+)
G1187618 NA non-coding downstream 31107 54766482 ~ 54767157 (+)
G1187626 NA non-coding downstream 45258 54780633 ~ 54780952 (+)
axin2 LOC105026129 other upstream 434734 54272638 ~ 54300365 (+)
G1187390 NA other upstream 470019 54264066 ~ 54265028 (+)
G1187452 NA other upstream 537032 54188567 ~ 54198015 (+)
LOC110538743 LOC106601732 other upstream 1284583 53445335 ~ 53450473 (+)
LOC110539012 LOC106606743 other upstream 1712066 52907896 ~ 53046938 (+)
G1188344 NA other downstream 258299 54993674 ~ 54997295 (+)
G1188386 NA other downstream 385886 55121261 ~ 55122619 (+)
G1189040 NA other downstream 1203097 55938472 ~ 55939357 (+)
G1189738 NA other downstream 2101041 56836416 ~ 56836996 (+)

Expression


Co-expression Network