G1188232


Basic Information

Item Value
gene id G1188232
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54762033 ~ 54762940 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355164
atttttttaatgaatttatttgcaaattatggtgagaAAATAAggatttggtcaataacaaaagtttatctcaatactttgttctataccctttgttggcaatgacagaggtcaaacggtttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacacagaacttgaacaattggtggctgactaaatacttttttgccccactgtatataactaCAGAAGCAGAATGACTAGCTATATAACTACAGTACCATAATGACTAGCTTTATAACTACAGTACCAGAACAGAATGAGTAGCTTTATAACTACAGTAGCAGAACAGAATACCTAGCTTTATAACTACAGTACCAGAACAGAATGACTAGCTATATAACTACAGTACCAGAACAGAATGACCAGCTTTATAACTAGAGTACCAGGACAGAATGACTAGCTATATAACTACAATACCAGAACAGAATGACTAGCTATATAACTACAGTAGCAGAACAGAATGACTAgctttataactacagtagaagaACAGAATGACTAGCTATATAACTACAGTAGCAGAACAGAATGACTAGCTATatagagtgccttgcgaaagtattcggcccccttgaactttgcgacattttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaacttaaaaattgggcgtgcaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355164 True 850 lncRNA 0.36 2 54762033 54762940

Neighbor

gene id symbol gene type direction distance location
LOC110486825 LOC106606691 coding downstream 13324 54741479 ~ 54748709 (-)
LOC118938329 aqp8 coding downstream 21310 54736714 ~ 54740723 (-)
LOC110538769 NA coding downstream 334582 54426436 ~ 54427451 (-)
LOC118938612 NA coding downstream 335629 54426263 ~ 54426404 (-)
si:ch73-374l24.1 LOC105026133 coding downstream 712441 53806640 ~ 54049592 (-)
LOC110485228 LOC106606689 coding upstream 50182 54813122 ~ 54831352 (-)
LOC110486827 LOC106606694 coding upstream 70170 54809618 ~ 54889445 (-)
trnaa-ugc-61 NA coding upstream 92595 54855535 ~ 54855610 (-)
LOC118938095 LOC106601785 coding upstream 126665 54889605 ~ 54890333 (-)
LOC110486831 e4f1 coding upstream 132126 54895066 ~ 54907473 (-)
G1188204 NA non-coding downstream 70575 54689825 ~ 54691458 (-)
G1188198 NA non-coding downstream 104867 54656870 ~ 54657166 (-)
G1188197 NA non-coding downstream 113137 54648283 ~ 54648896 (-)
G1188176 NA non-coding downstream 120538 54573900 ~ 54641495 (-)
G1188189 NA non-coding downstream 151518 54608498 ~ 54610515 (-)
G1188235 NA non-coding upstream 2625 54765565 ~ 54767157 (-)
G1188252 LOC106606653 non-coding upstream 38009 54800949 ~ 54802533 (-)
G1188256 NA non-coding upstream 41014 54803954 ~ 54805755 (-)
G1188257 NA non-coding upstream 51870 54814810 ~ 54816466 (-)
G1188186 LOC106588841 other downstream 161584 54599401 ~ 54600449 (-)
G1188127 LOC106601757 other downstream 291195 54409911 ~ 54470838 (-)
G1188147 NA other downstream 312013 54448883 ~ 54450020 (-)
LOC110486836 LOC106606701 other upstream 259708 55022619 ~ 55026465 (-)
LOC110516592 LOC106601772 other upstream 448559 55209614 ~ 55242150 (-)
LOC110485238 LOC106601829 other upstream 671876 55434816 ~ 55509918 (-)
G1189279 LOC106601786 other upstream 1149284 55912224 ~ 55915885 (-)

Expression


Co-expression Network