Gene
RNA
| Item | Value |
|---|---|
| gene id | G1188275 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 54854105 ~ 54854476 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1355218 | True | 300 | lncRNA | 0.33 | 2 | 54854105 | 54854476 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485228 | LOC106606689 | coding | downstream | 22753 | 54813122 ~ 54831352 (-) |
| LOC110486825 | LOC106606691 | coding | downstream | 105396 | 54741479 ~ 54748709 (-) |
| LOC118938329 | aqp8 | coding | downstream | 113382 | 54736714 ~ 54740723 (-) |
| LOC110538769 | NA | coding | downstream | 426654 | 54426436 ~ 54427451 (-) |
| LOC118938612 | NA | coding | downstream | 427701 | 54426263 ~ 54426404 (-) |
| trnaa-ugc-61 | NA | coding | upstream | 1059 | 54855535 ~ 54855610 (-) |
| LOC118938095 | LOC106601785 | coding | upstream | 35129 | 54889605 ~ 54890333 (-) |
| LOC110486831 | e4f1 | coding | upstream | 40590 | 54895066 ~ 54907473 (-) |
| LOC110486844 | LOC106606699 | coding | upstream | 78690 | 54933166 ~ 54938835 (-) |
| LOC110485232 | LOC106606700 | coding | upstream | 91885 | 54946361 ~ 54975807 (-) |
| G1188270 | NA | non-coding | downstream | 5799 | 54845460 ~ 54848306 (-) |
| LOC110486827 | LOC106606694 | non-coding | downstream | 20453 | 54809618 ~ 54889445 (-) |
| G1188259 | NA | non-coding | downstream | 36591 | 54816985 ~ 54817514 (-) |
| G1188257 | NA | non-coding | downstream | 37639 | 54814810 ~ 54816466 (-) |
| G1188256 | NA | non-coding | downstream | 48350 | 54803954 ~ 54805755 (-) |
| G1188281 | NA | non-coding | upstream | 14091 | 54868567 ~ 54873998 (-) |
| G1188311 | LOC106606697 | non-coding | upstream | 77248 | 54931724 ~ 54974451 (-) |
| G1188327 | NA | non-coding | upstream | 121720 | 54976196 ~ 54976771 (-) |
| G1188342 | NA | non-coding | upstream | 138050 | 54992526 ~ 54992792 (-) |
| G1188399 | NA | non-coding | upstream | 145057 | 54999533 ~ 55002316 (-) |
| G1188186 | LOC106588841 | other | downstream | 253656 | 54599401 ~ 54600449 (-) |
| G1188127 | LOC106601757 | other | downstream | 383267 | 54409911 ~ 54470838 (-) |
| G1188147 | NA | other | downstream | 404085 | 54448883 ~ 54450020 (-) |
| LOC110486836 | LOC106606701 | other | upstream | 168172 | 55022619 ~ 55026465 (-) |
| LOC110516592 | LOC106601772 | other | upstream | 357023 | 55209614 ~ 55242150 (-) |
| LOC110485238 | LOC106601829 | other | upstream | 580340 | 55434816 ~ 55509918 (-) |
| G1189279 | LOC106601786 | other | upstream | 1057748 | 55912224 ~ 55915885 (-) |
| LOC110485237 | LOC106606659 | other | upstream | 1253468 | 56088292 ~ 56110984 (-) |
