G1188311 (LOC106606697)


Basic Information

Item Value
gene id G1188311
gene name LOC106606697
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54931724 ~ 54974451 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355260
AAGTCCCTGGGACAAAGAGacggtagaggagagagacaaagagacggTGAAGGAAAGTGCTAAATTCAGTCATCCAGTACAGATGGAGCATAAACATTAACCCAAGGTCAAGTTGTGTGATTTCACTCAAATGGTTCAAATAATCCTAGAATAGGGATGCATCTCAATAGACAAAATGTATGTGCATCATgcctttttctttatttctactgaTATTAAAGAACTAAGACAGGTGACAGAAAATACCCAACAAGAACCGGCCATGTTGCTTCCACCTAACCTGTGTTAAACTCAATGGAGATGAAACAGAGAGGGCTACTTTAGACACTTGAGATGCACCCTGACACttgaggacagaccattcacttACAGAAACCCTTCAACATCCTTTCACCCTCTTCTTCACCATTTGACAAGGAGTCCGTTGGTGGCCTTGTCCACTGCATGGTACTGTGTGTGCAGCAGCTCcctggctctctcctctcctacactCTGTAGCCAGGACTGGTAAAGCTCTGCCACGTGCTGGTCCTCCTCTGGCACTAGAGGGCGCTCCTCCTTGTACAGATCCTCCACCTGCTGCAGCAACTCCTTGTTGTTCTGCTCTGGTAAGGGCTTCACCTGGCCTCCCCCATTCAGAC

Function

NR:

description
cytosolic Fe-S cluster assembly factor narfl-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355260 True 641 lncRNA 0.47 2 54931724 54974451

Neighbor

gene id symbol gene type direction distance location
LOC110486831 e4f1 coding downstream 24251 54895066 ~ 54907473 (-)
LOC118938095 LOC106601785 coding downstream 41391 54889605 ~ 54890333 (-)
LOC110486827 LOC106606694 coding downstream 42279 54809618 ~ 54889445 (-)
trnaa-ugc-61 NA coding downstream 76114 54855535 ~ 54855610 (-)
LOC110485228 LOC106606689 coding downstream 100372 54813122 ~ 54831352 (-)
LOC118938330 LOC106601777 coding upstream 29509 55003960 ~ 55011294 (-)
LOC110486834 LOC106601778 coding upstream 39404 55013855 ~ 55016528 (-)
LOC110486836 LOC106606701 coding upstream 48168 55022619 ~ 55026465 (-)
LOC110514491 LOC106606702 coding upstream 55086 55029537 ~ 55159189 (-)
LOC110516592 LOC106601772 coding upstream 235163 55209614 ~ 55242150 (-)
G1188281 NA non-coding downstream 57726 54868567 ~ 54873998 (-)
G1188275 NA non-coding downstream 77248 54854105 ~ 54854476 (-)
G1188270 NA non-coding downstream 83418 54845460 ~ 54848306 (-)
G1188327 NA non-coding upstream 1745 54976196 ~ 54976771 (-)
G1188342 NA non-coding upstream 18075 54992526 ~ 54992792 (-)
G1188399 NA non-coding upstream 25082 54999533 ~ 55002316 (-)
G1188402 NA non-coding upstream 38495 55012946 ~ 55013237 (-)
G1188404 NA non-coding upstream 44539 55018990 ~ 55019272 (-)
LOC110486825 LOC106606691 other downstream 183066 54741479 ~ 54748709 (-)
G1188186 LOC106588841 other downstream 331275 54599401 ~ 54600449 (-)
G1188127 LOC106601757 other downstream 460886 54409911 ~ 54470838 (-)
G1188147 NA other downstream 481704 54448883 ~ 54450020 (-)
LOC110485238 LOC106601829 other upstream 460365 55434816 ~ 55509918 (-)
G1189279 LOC106601786 other upstream 937773 55912224 ~ 55915885 (-)
LOC110485237 LOC106606659 other upstream 1133493 56088292 ~ 56110984 (-)

Expression


Co-expression Network