G1188327


Basic Information

Item Value
gene id G1188327
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54976196 ~ 54976771 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355277
tatttatataaaggaaatttgtcttttgtgtctgttgaaaattaaagattactgacagagccataagaaaatattgctttatttatctgatcatattgtaatatatttgttaggttttcagtaggttcaattaggttcactagactatatgcgtcatttaaaaatttttcaatgaacattcgaacagtccggccctcgtcttgtagctgatttttttatttggccctccgtccatttgactttgacacccctgatctactgcatcttgcctatgccgttctgtaccatcactcattcatatatctttatgtacatattcttatccctttacacttgtgtcctACTAGGTTACATCAAACACTGTATCTACAACAGGTATGCTTGGGAAGGAGTTTGGGGCGGGGCCCTGCTTTTCAAGTCTTTGTTGTGAGACTTGTGTCAGTAGATATGAAAGGACTGCCGCACCACTTGTTCTTATGACAAGGAGTCTCAAGGTGCAGATAAAGTACAAGGGTTTGGATGGATGTCCTGAGGGCCTTTCTCATTCATAAGAGGAACGTTTCATCTATCATGGGG

Function

NR:

description
PREDICTED: CUB and zona pellucida-like domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355277 True 576 lncRNA 0.39 1 54976196 54976771

Neighbor

gene id symbol gene type direction distance location
LOC110485232 LOC106606700 coding downstream 389 54946361 ~ 54975807 (-)
LOC110486844 LOC106606699 coding downstream 37361 54933166 ~ 54938835 (-)
LOC110486831 e4f1 coding downstream 68723 54895066 ~ 54907473 (-)
LOC118938095 LOC106601785 coding downstream 85863 54889605 ~ 54890333 (-)
LOC110486827 LOC106606694 coding downstream 86751 54809618 ~ 54889445 (-)
LOC118938330 LOC106601777 coding upstream 27189 55003960 ~ 55011294 (-)
LOC110486834 LOC106601778 coding upstream 37084 55013855 ~ 55016528 (-)
LOC110486836 LOC106606701 coding upstream 45848 55022619 ~ 55026465 (-)
LOC110514491 LOC106606702 coding upstream 52766 55029537 ~ 55159189 (-)
LOC110516592 LOC106601772 coding upstream 232843 55209614 ~ 55242150 (-)
G1188311 LOC106606697 non-coding downstream 1745 54931724 ~ 54974451 (-)
G1188281 NA non-coding downstream 102198 54868567 ~ 54873998 (-)
G1188275 NA non-coding downstream 121720 54854105 ~ 54854476 (-)
G1188270 NA non-coding downstream 127890 54845460 ~ 54848306 (-)
G1188259 NA non-coding downstream 158682 54816985 ~ 54817514 (-)
G1188342 NA non-coding upstream 15755 54992526 ~ 54992792 (-)
G1188399 NA non-coding upstream 22762 54999533 ~ 55002316 (-)
G1188402 NA non-coding upstream 36175 55012946 ~ 55013237 (-)
G1188404 NA non-coding upstream 42219 55018990 ~ 55019272 (-)
G1188408 NA non-coding upstream 50349 55027120 ~ 55027376 (-)
LOC110485228 LOC106606689 other downstream 144874 54813122 ~ 54831352 (-)
LOC110486825 LOC106606691 other downstream 227538 54741479 ~ 54748709 (-)
G1188186 LOC106588841 other downstream 375747 54599401 ~ 54600449 (-)
G1188127 LOC106601757 other downstream 505358 54409911 ~ 54470838 (-)
G1188147 NA other downstream 526176 54448883 ~ 54450020 (-)
LOC110485238 LOC106601829 other upstream 458045 55434816 ~ 55509918 (-)
G1189279 LOC106601786 other upstream 935453 55912224 ~ 55915885 (-)
LOC110485237 LOC106606659 other upstream 1131173 56088292 ~ 56110984 (-)

Expression


Co-expression Network