G1188328


Basic Information

Item Value
gene id G1188328
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54979619 ~ 54979889 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355278
AGCATCTCCAGTTTGAATCAACTGGATGAGAGATCATCTGTCTGGGAACCACATGTACACAGACACCCAAGTCAGCTAGGTGAAGTCAGCTAGCCCAATTCAGCTAGTTGAAGTCAGATAGCCCAAGTCAGCTAGGTGAAGTCAGCTAGCCCAAGTCAGCTAGGTGAAGTCAGCTAGCCCACGTCAGCTAGGTGAAGTCAGCTAGCCCAAGTCAGCTAGCCCAAGTCAGCTAGCCCAAGTCAGCTAGCCCAATTCAGCTAGTTGAAGTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355278 True 271 lncRNA 0.51 1 54979619 54979889

Neighbor

gene id symbol gene type direction distance location
LOC110486846 LOC106601652 coding upstream 39128 54939020 ~ 54940491 (+)
narfl LOC106606697 coding upstream 46197 54925567 ~ 54933422 (+)
LOC110486830 LOC106606695 coding upstream 54178 54907568 ~ 54925441 (+)
LOC110485227 LOC106606653 coding upstream 169491 54755882 ~ 54810128 (+)
LOC110486811 LOC106601768 coding upstream 248254 54720661 ~ 54731365 (+)
LOC110539040 LOC106601832 coding downstream 360813 55340702 ~ 55394765 (+)
LOC110538788 bri3 coding downstream 444976 55424865 ~ 56123584 (+)
LOC110538766 LOC105013005 coding downstream 854222 55834111 ~ 55915904 (+)
LOC110485236 LOC106606588 coding downstream 1055751 56035640 ~ 56088193 (+)
LOC110486855 bri3 coding downstream 1134274 56114163 ~ 56121445 (+)
G1187645 NA non-coding upstream 144236 54833998 ~ 54835383 (+)
G1187638 NA non-coding upstream 152661 54826415 ~ 54826958 (+)
G1187626 NA non-coding upstream 198667 54780633 ~ 54780952 (+)
G1187618 NA non-coding upstream 212462 54766482 ~ 54767157 (+)
G1188331 NA non-coding downstream 2343 54982232 ~ 54982474 (+)
G1188334 NA non-coding downstream 4577 54984466 ~ 54984780 (+)
G1188343 NA non-coding downstream 20595 55000484 ~ 55002271 (+)
G1188347 LOC106601778 non-coding downstream 33979 55013868 ~ 55016506 (+)
G1188352 LOC106606701 non-coding downstream 43534 55023423 ~ 55026525 (+)
axin2 LOC105026129 other upstream 679306 54272638 ~ 54300365 (+)
G1187390 NA other upstream 714591 54264066 ~ 54265028 (+)
G1187452 NA other upstream 781604 54188567 ~ 54198015 (+)
LOC110538743 LOC106601732 other upstream 1529155 53445335 ~ 53450473 (+)
LOC110539012 LOC106606743 other upstream 1956638 52907896 ~ 53046938 (+)
G1188344 NA other downstream 13785 54993674 ~ 54997295 (+)
G1188386 NA other downstream 141372 55121261 ~ 55122619 (+)
G1189040 NA other downstream 958583 55938472 ~ 55939357 (+)
G1189738 NA other downstream 1856527 56836416 ~ 56836996 (+)

Expression


Co-expression Network