G1188331


Basic Information

Item Value
gene id G1188331
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54982232 ~ 54982474 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355281
acacacacacacacacacacacacacacacacacgtatacacacacctCTGATTGTAAAAGGATATCCCCCTGGGTCTACAGTCAGACAGGATCTCAGAATTCAAAGAGATACAACAAAGTCGATGGTGACACAGTTCTatacagtgaaagcaccacccctcctctcttcctccctcccttttttTCATTCCCTCTTTTATCTGAATGCCACAGGTgaatgatagatggatggagagatggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355281 True 243 lncRNA 0.45 1 54982232 54982474

Neighbor

gene id symbol gene type direction distance location
LOC110486846 LOC106601652 coding upstream 41741 54939020 ~ 54940491 (+)
narfl LOC106606697 coding upstream 48810 54925567 ~ 54933422 (+)
LOC110486830 LOC106606695 coding upstream 56791 54907568 ~ 54925441 (+)
LOC110485227 LOC106606653 coding upstream 172104 54755882 ~ 54810128 (+)
LOC110486811 LOC106601768 coding upstream 250867 54720661 ~ 54731365 (+)
LOC110539040 LOC106601832 coding downstream 358228 55340702 ~ 55394765 (+)
LOC110538788 bri3 coding downstream 442391 55424865 ~ 56123584 (+)
LOC110538766 LOC105013005 coding downstream 851637 55834111 ~ 55915904 (+)
LOC110485236 LOC106606588 coding downstream 1053166 56035640 ~ 56088193 (+)
LOC110486855 bri3 coding downstream 1131689 56114163 ~ 56121445 (+)
G1188328 NA non-coding upstream 2343 54979619 ~ 54979889 (+)
G1187645 NA non-coding upstream 146849 54833998 ~ 54835383 (+)
G1187638 NA non-coding upstream 155274 54826415 ~ 54826958 (+)
G1187626 NA non-coding upstream 201280 54780633 ~ 54780952 (+)
G1188334 NA non-coding downstream 1992 54984466 ~ 54984780 (+)
G1188343 NA non-coding downstream 18010 55000484 ~ 55002271 (+)
G1188347 LOC106601778 non-coding downstream 31394 55013868 ~ 55016506 (+)
G1188352 LOC106606701 non-coding downstream 40949 55023423 ~ 55026525 (+)
G1188355 NA non-coding downstream 45230 55027704 ~ 55028092 (+)
axin2 LOC105026129 other upstream 681919 54272638 ~ 54300365 (+)
G1187390 NA other upstream 717204 54264066 ~ 54265028 (+)
G1187452 NA other upstream 784217 54188567 ~ 54198015 (+)
LOC110538743 LOC106601732 other upstream 1531768 53445335 ~ 53450473 (+)
LOC110539012 LOC106606743 other upstream 1959251 52907896 ~ 53046938 (+)
G1188344 NA other downstream 11200 54993674 ~ 54997295 (+)
G1188386 NA other downstream 138787 55121261 ~ 55122619 (+)
G1189040 NA other downstream 955998 55938472 ~ 55939357 (+)
G1189738 NA other downstream 1853942 56836416 ~ 56836996 (+)

Expression


Co-expression Network