Gene
RNA
| Item | Value |
|---|---|
| gene id | G1188404 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 55018990 ~ 55019272 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1355398 | True | 224 | lncRNA | 0.42 | 2 | 55018990 | 55019272 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486834 | LOC106601778 | coding | downstream | 2462 | 55013855 ~ 55016528 (-) |
| LOC118938330 | LOC106601777 | coding | downstream | 7696 | 55003960 ~ 55011294 (-) |
| LOC110485232 | LOC106606700 | coding | downstream | 43183 | 54946361 ~ 54975807 (-) |
| LOC110486844 | LOC106606699 | coding | downstream | 80155 | 54933166 ~ 54938835 (-) |
| LOC110486831 | e4f1 | coding | downstream | 111517 | 54895066 ~ 54907473 (-) |
| LOC110486836 | LOC106606701 | coding | upstream | 3347 | 55022619 ~ 55026465 (-) |
| LOC110514491 | LOC106606702 | coding | upstream | 10265 | 55029537 ~ 55159189 (-) |
| LOC110516592 | LOC106601772 | coding | upstream | 190342 | 55209614 ~ 55242150 (-) |
| LOC110486847 | LOC106606650 | coding | upstream | 235425 | 55254697 ~ 55276671 (-) |
| aimp2 | aimp2 | coding | upstream | 269878 | 55289150 ~ 55293431 (-) |
| G1188402 | NA | non-coding | downstream | 5753 | 55012946 ~ 55013237 (-) |
| G1188399 | NA | non-coding | downstream | 16674 | 54999533 ~ 55002316 (-) |
| G1188342 | NA | non-coding | downstream | 26198 | 54992526 ~ 54992792 (-) |
| G1188327 | NA | non-coding | downstream | 42219 | 54976196 ~ 54976771 (-) |
| G1188311 | LOC106606697 | non-coding | downstream | 44539 | 54931724 ~ 54974451 (-) |
| G1188408 | NA | non-coding | upstream | 7848 | 55027120 ~ 55027376 (-) |
| G1188412 | NA | non-coding | upstream | 18482 | 55037754 ~ 55038280 (-) |
| G1188459 | NA | non-coding | upstream | 142832 | 55162104 ~ 55162455 (-) |
| G1188461 | NA | non-coding | upstream | 145474 | 55164746 ~ 55165054 (-) |
| G1188467 | NA | non-coding | upstream | 149536 | 55168808 ~ 55169047 (-) |
| LOC110485228 | LOC106606689 | other | downstream | 187668 | 54813122 ~ 54831352 (-) |
| LOC110486825 | LOC106606691 | other | downstream | 270332 | 54741479 ~ 54748709 (-) |
| G1188186 | LOC106588841 | other | downstream | 418541 | 54599401 ~ 54600449 (-) |
| G1188127 | LOC106601757 | other | downstream | 548152 | 54409911 ~ 54470838 (-) |
| G1188147 | NA | other | downstream | 568970 | 54448883 ~ 54450020 (-) |
| LOC110485238 | LOC106601829 | other | upstream | 415544 | 55434816 ~ 55509918 (-) |
| G1189279 | LOC106601786 | other | upstream | 892952 | 55912224 ~ 55915885 (-) |
| LOC110485237 | LOC106606659 | other | upstream | 1088672 | 56088292 ~ 56110984 (-) |
