G1188355


Basic Information

Item Value
gene id G1188355
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 55027704 ~ 55028092 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355329
aaaatgcagcgtgtagattgcgatccatgttttaatgaacaaacgtaaaacacgaatcaatacaaacactacaaaaacaataaacgtaacgaaaaccgaaacagcctatacttgtgtaaaactaacacagaacaaggacatcatgatactaaggacaatcacccacaaacacacagtgaaacccaggctacctaaatatggttcccaatcagagacaatgactaacacctgcctctgattgagaaccatatcaggccagacatagaaatagacaaacaagacatccaacatagaatgcccacccagttcacgtcctgaccaacactaaaacaaggaaaacacacacgaacgatggtcagaacgtgacaattaaagtgactattcataga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355329 True 389 lncRNA 0.39 1 55027704 55028092

Neighbor

gene id symbol gene type direction distance location
LOC110486846 LOC106601652 coding upstream 87213 54939020 ~ 54940491 (+)
narfl LOC106606697 coding upstream 94282 54925567 ~ 54933422 (+)
LOC110486830 LOC106606695 coding upstream 102263 54907568 ~ 54925441 (+)
LOC110485227 LOC106606653 coding upstream 217576 54755882 ~ 54810128 (+)
LOC110486811 LOC106601768 coding upstream 296339 54720661 ~ 54731365 (+)
LOC110539040 LOC106601832 coding downstream 312610 55340702 ~ 55394765 (+)
LOC110538788 bri3 coding downstream 396773 55424865 ~ 56123584 (+)
LOC110538766 LOC105013005 coding downstream 806019 55834111 ~ 55915904 (+)
LOC110485236 LOC106606588 coding downstream 1007548 56035640 ~ 56088193 (+)
LOC110486855 bri3 coding downstream 1086071 56114163 ~ 56121445 (+)
G1188352 LOC106606701 non-coding upstream 1179 55023423 ~ 55026525 (+)
G1188347 LOC106601778 non-coding upstream 11198 55013868 ~ 55016506 (+)
G1188343 NA non-coding upstream 25433 55000484 ~ 55002271 (+)
G1188334 NA non-coding upstream 42924 54984466 ~ 54984780 (+)
G1188331 NA non-coding upstream 45230 54982232 ~ 54982474 (+)
G1188375 NA non-coding downstream 54123 55082215 ~ 55082736 (+)
G1188385 NA non-coding downstream 91694 55119786 ~ 55120235 (+)
G1188471 NA non-coding downstream 145414 55173506 ~ 55173710 (+)
G1188472 NA non-coding downstream 146189 55174281 ~ 55174523 (+)
G1188473 NA non-coding downstream 147967 55176059 ~ 55176267 (+)
G1188344 NA other upstream 30409 54993674 ~ 54997295 (+)
axin2 LOC105026129 other upstream 727391 54272638 ~ 54300365 (+)
G1187390 NA other upstream 762676 54264066 ~ 54265028 (+)
G1187452 NA other upstream 829689 54188567 ~ 54198015 (+)
LOC110538743 LOC106601732 other upstream 1577240 53445335 ~ 53450473 (+)
G1188386 NA other downstream 93169 55121261 ~ 55122619 (+)
G1189040 NA other downstream 910380 55938472 ~ 55939357 (+)
G1189738 NA other downstream 1808324 56836416 ~ 56836996 (+)
G1189675 srebf1 other downstream 1849836 56877928 ~ 56925607 (+)

Expression


Co-expression Network