G1188412


Basic Information

Item Value
gene id G1188412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 55037754 ~ 55038280 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355410
gtcctaaccttaacctaatgcTCCTAACCCGCTAGGTTATTATCCTATCCTGCTCCATAAATTATCCTAACCTGATAGGTTAATTGTCCTATCCTGTtccgtaagttctcctaacctgcaagGTTAATTGTCCTATCCTGctccgtaagttctcctaacctgctaggttAATTAATGTATCCTGCTccataaattctcctaacctgctaggttAATTGTCCTATCCTGctccgtaagttctcctaacctgctaggttaattgtcctatcctcctccttaagttctcctaacctgctaggttAATTGTCCTATCCTCctccgtaagttctcctaacctgctaggttAATTGTCCTATCCTCctccgtaagttctcctaacctgctaggttAATTGTCCTATCCTCctccgtaagttctcctaacctgctaggttAATTGTCCTATCCTCctccgtaagttctcctaacctgctaggttAATTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355410 True 483 lncRNA 0.43 2 55037754 55038280

Neighbor

gene id symbol gene type direction distance location
LOC110486836 LOC106606701 coding downstream 11289 55022619 ~ 55026465 (-)
LOC110486834 LOC106601778 coding downstream 21226 55013855 ~ 55016528 (-)
LOC118938330 LOC106601777 coding downstream 26460 55003960 ~ 55011294 (-)
LOC110485232 LOC106606700 coding downstream 61947 54946361 ~ 54975807 (-)
LOC110486844 LOC106606699 coding downstream 98919 54933166 ~ 54938835 (-)
LOC110516592 LOC106601772 coding upstream 171334 55209614 ~ 55242150 (-)
LOC110486847 LOC106606650 coding upstream 216417 55254697 ~ 55276671 (-)
aimp2 aimp2 coding upstream 250870 55289150 ~ 55293431 (-)
LOC110486849 LOC106601824 coding upstream 274010 55312290 ~ 55316734 (-)
pvalb1 pvalb1 coding upstream 283319 55321599 ~ 55324310 (-)
G1188408 NA non-coding downstream 10378 55027120 ~ 55027376 (-)
G1188404 NA non-coding downstream 18482 55018990 ~ 55019272 (-)
G1188402 NA non-coding downstream 24517 55012946 ~ 55013237 (-)
G1188399 NA non-coding downstream 35438 54999533 ~ 55002316 (-)
G1188342 NA non-coding downstream 44962 54992526 ~ 54992792 (-)
G1188459 NA non-coding upstream 123824 55162104 ~ 55162455 (-)
G1188461 NA non-coding upstream 126466 55164746 ~ 55165054 (-)
G1188467 NA non-coding upstream 130528 55168808 ~ 55169047 (-)
G1188469 NA non-coding upstream 131834 55170114 ~ 55170416 (-)
G1188474 NA non-coding upstream 137750 55176030 ~ 55176267 (-)
LOC110485228 LOC106606689 other downstream 206432 54813122 ~ 54831352 (-)
LOC110486825 LOC106606691 other downstream 289096 54741479 ~ 54748709 (-)
G1188186 LOC106588841 other downstream 437305 54599401 ~ 54600449 (-)
G1188127 LOC106601757 other downstream 566916 54409911 ~ 54470838 (-)
LOC110485238 LOC106601829 other upstream 396536 55434816 ~ 55509918 (-)
G1189279 LOC106601786 other upstream 873944 55912224 ~ 55915885 (-)
LOC110485237 LOC106606659 other upstream 1069664 56088292 ~ 56110984 (-)
G1189660 LOC106601786 other upstream 1632013 56670293 ~ 56674238 (-)

Expression


Co-expression Network