Gene
RNA
| Item | Value |
|---|---|
| gene id | G1188469 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 55170114 ~ 55170416 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1355486 | True | 303 | lncRNA | 0.39 | 1 | 55170114 | 55170416 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514491 | LOC106606702 | coding | downstream | 10925 | 55029537 ~ 55159189 (-) |
| LOC110486836 | LOC106606701 | coding | downstream | 143649 | 55022619 ~ 55026465 (-) |
| LOC110486834 | LOC106601778 | coding | downstream | 153586 | 55013855 ~ 55016528 (-) |
| LOC118938330 | LOC106601777 | coding | downstream | 158820 | 55003960 ~ 55011294 (-) |
| LOC110485232 | LOC106606700 | coding | downstream | 194307 | 54946361 ~ 54975807 (-) |
| LOC110516592 | LOC106601772 | coding | upstream | 39198 | 55209614 ~ 55242150 (-) |
| LOC110486847 | LOC106606650 | coding | upstream | 84281 | 55254697 ~ 55276671 (-) |
| aimp2 | aimp2 | coding | upstream | 118734 | 55289150 ~ 55293431 (-) |
| LOC110486849 | LOC106601824 | coding | upstream | 141874 | 55312290 ~ 55316734 (-) |
| pvalb1 | pvalb1 | coding | upstream | 151183 | 55321599 ~ 55324310 (-) |
| G1188467 | NA | non-coding | downstream | 1067 | 55168808 ~ 55169047 (-) |
| G1188461 | NA | non-coding | downstream | 5060 | 55164746 ~ 55165054 (-) |
| G1188459 | NA | non-coding | downstream | 7659 | 55162104 ~ 55162455 (-) |
| G1188412 | NA | non-coding | downstream | 131834 | 55037754 ~ 55038280 (-) |
| G1188408 | NA | non-coding | downstream | 142738 | 55027120 ~ 55027376 (-) |
| G1188474 | NA | non-coding | upstream | 5614 | 55176030 ~ 55176267 (-) |
| G1188490 | NA | non-coding | upstream | 28678 | 55199094 ~ 55200351 (-) |
| G1188632 | NA | non-coding | upstream | 35430 | 55205846 ~ 55207198 (-) |
| G1188638 | NA | non-coding | upstream | 73129 | 55243545 ~ 55254482 (-) |
| LOC110485228 | LOC106606689 | other | downstream | 338792 | 54813122 ~ 54831352 (-) |
| LOC110486825 | LOC106606691 | other | downstream | 421456 | 54741479 ~ 54748709 (-) |
| G1188186 | LOC106588841 | other | downstream | 569665 | 54599401 ~ 54600449 (-) |
| G1188127 | LOC106601757 | other | downstream | 699276 | 54409911 ~ 54470838 (-) |
| LOC110485238 | LOC106601829 | other | upstream | 264400 | 55434816 ~ 55509918 (-) |
| G1189279 | LOC106601786 | other | upstream | 741808 | 55912224 ~ 55915885 (-) |
| LOC110485237 | LOC106606659 | other | upstream | 937528 | 56088292 ~ 56110984 (-) |
| G1189660 | LOC106601786 | other | upstream | 1499877 | 56670293 ~ 56674238 (-) |
