Gene
RNA
| Item | Value |
|---|---|
| gene id | G1188482 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 55192387 ~ 55192617 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1355500 | True | 231 | lncRNA | 0.39 | 1 | 55192387 | 55192617 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486846 | LOC106601652 | coding | upstream | 251896 | 54939020 ~ 54940491 (+) |
| narfl | LOC106606697 | coding | upstream | 258965 | 54925567 ~ 54933422 (+) |
| LOC110486830 | LOC106606695 | coding | upstream | 266946 | 54907568 ~ 54925441 (+) |
| LOC110485227 | LOC106606653 | coding | upstream | 382259 | 54755882 ~ 54810128 (+) |
| LOC110486811 | LOC106601768 | coding | upstream | 461022 | 54720661 ~ 54731365 (+) |
| LOC110539040 | LOC106601832 | coding | downstream | 148085 | 55340702 ~ 55394765 (+) |
| LOC110538788 | bri3 | coding | downstream | 232248 | 55424865 ~ 56123584 (+) |
| LOC110538766 | LOC105013005 | coding | downstream | 641494 | 55834111 ~ 55915904 (+) |
| LOC110485236 | LOC106606588 | coding | downstream | 843023 | 56035640 ~ 56088193 (+) |
| LOC110486855 | bri3 | coding | downstream | 921546 | 56114163 ~ 56121445 (+) |
| G1188473 | NA | non-coding | upstream | 16120 | 55176059 ~ 55176267 (+) |
| G1188472 | NA | non-coding | upstream | 17864 | 55174281 ~ 55174523 (+) |
| G1188471 | NA | non-coding | upstream | 18677 | 55173506 ~ 55173710 (+) |
| G1188385 | NA | non-coding | upstream | 72152 | 55119786 ~ 55120235 (+) |
| G1188375 | NA | non-coding | upstream | 109651 | 55082215 ~ 55082736 (+) |
| G1188488 | NA | non-coding | downstream | 8296 | 55200913 ~ 55201237 (+) |
| G1188495 | NA | non-coding | downstream | 13197 | 55205814 ~ 55206413 (+) |
| G1188500 | NA | non-coding | downstream | 95937 | 55288554 ~ 55288945 (+) |
| G1188499 | aimp2 | non-coding | downstream | 96534 | 55289151 ~ 55293390 (+) |
| G1188534 | NA | non-coding | downstream | 101964 | 55294581 ~ 55294846 (+) |
| G1188386 | NA | other | upstream | 69768 | 55121261 ~ 55122619 (+) |
| G1188344 | NA | other | upstream | 195092 | 54993674 ~ 54997295 (+) |
| axin2 | LOC105026129 | other | upstream | 892074 | 54272638 ~ 54300365 (+) |
| G1187390 | NA | other | upstream | 927359 | 54264066 ~ 54265028 (+) |
| G1187452 | NA | other | upstream | 994372 | 54188567 ~ 54198015 (+) |
| G1189040 | NA | other | downstream | 745855 | 55938472 ~ 55939357 (+) |
| G1189738 | NA | other | downstream | 1643799 | 56836416 ~ 56836996 (+) |
| G1189675 | srebf1 | other | downstream | 1685311 | 56877928 ~ 56925607 (+) |
| G1189819 | NA | other | downstream | 1861836 | 57054453 ~ 57055617 (+) |
