G1188500


Basic Information

Item Value
gene id G1188500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 55288554 ~ 55288945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355523
GTGAAATATTCCTTCAAGGTCATTCTGTGTGTAACACCTAAcacttacactgagtgtacaaaacattaggaataccttcctaatattgacttaGCCCCTCTTCTGCTCTTAGAACAGCCCGatttcatcagggcatggactctaccaggtgtcgaaagccttccacagggatgctgacccatgttgactccagttggctggatgtcctttgggtggtggaccattcttgcagttcttgacacaaacaggtgcgcctggcacctactatgtcttgcccattcaccctctaaatgacacacatacacaatccatgtctaattatctcaaggcttaaacatccttatttaacccgtctcctccccttcatcaacactgattgaagtggatttaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355523 True 392 lncRNA 0.45 1 55288554 55288945

Neighbor

gene id symbol gene type direction distance location
LOC110486846 LOC106601652 coding upstream 348063 54939020 ~ 54940491 (+)
narfl LOC106606697 coding upstream 355132 54925567 ~ 54933422 (+)
LOC110486830 LOC106606695 coding upstream 363113 54907568 ~ 54925441 (+)
LOC110485227 LOC106606653 coding upstream 478426 54755882 ~ 54810128 (+)
LOC110486811 LOC106601768 coding upstream 557189 54720661 ~ 54731365 (+)
LOC110539040 LOC106601832 coding downstream 51757 55340702 ~ 55394765 (+)
LOC110538788 bri3 coding downstream 135920 55424865 ~ 56123584 (+)
LOC110538766 LOC105013005 coding downstream 545166 55834111 ~ 55915904 (+)
LOC110485236 LOC106606588 coding downstream 746695 56035640 ~ 56088193 (+)
LOC110486855 bri3 coding downstream 825218 56114163 ~ 56121445 (+)
G1188495 NA non-coding upstream 82141 55205814 ~ 55206413 (+)
G1188488 NA non-coding upstream 87317 55200913 ~ 55201237 (+)
G1188482 NA non-coding upstream 95937 55192387 ~ 55192617 (+)
G1188473 NA non-coding upstream 112287 55176059 ~ 55176267 (+)
G1188472 NA non-coding upstream 114031 55174281 ~ 55174523 (+)
G1188499 aimp2 non-coding downstream 206 55289151 ~ 55293390 (+)
G1188534 NA non-coding downstream 5636 55294581 ~ 55294846 (+)
G1188535 NA non-coding downstream 7155 55296100 ~ 55296367 (+)
G1188540 NA non-coding downstream 23383 55312328 ~ 55313291 (+)
G1188543 NA non-coding downstream 30081 55319026 ~ 55319241 (+)
G1188386 NA other upstream 165935 55121261 ~ 55122619 (+)
G1188344 NA other upstream 291259 54993674 ~ 54997295 (+)
axin2 LOC105026129 other upstream 988241 54272638 ~ 54300365 (+)
G1187390 NA other upstream 1023526 54264066 ~ 54265028 (+)
G1187452 NA other upstream 1090539 54188567 ~ 54198015 (+)
G1189040 NA other downstream 649527 55938472 ~ 55939357 (+)
G1189738 NA other downstream 1547471 56836416 ~ 56836996 (+)
G1189675 srebf1 other downstream 1588983 56877928 ~ 56925607 (+)
G1189819 NA other downstream 1765508 57054453 ~ 57055617 (+)

Expression


Co-expression Network